Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0686 ATGAGAACCAGGCAAGGGAAGCGATCTGAGGCCTTTTGGCCTTCCATTGTGATGAAGAAATGGCTAAATATTAAGCCCAAGGCCTATGATTTCAGTGAAGATGAGGTTGACACTGAGACAGAGAGTGAGGATGATGCTTGCTCTCTTAAGGATGCAAGAGTACAGATGGGTGAGGACCATGCCTGTAGAATGCAGAGGAACCAATCCGTATGCACGAATCAAACTTCAGAGTCGAAGGGCTATTCATCAAGTCACAGAAGAGGAAAATCAGAAACTCTGCGTGTTCACTACATAAACAGAAAGGATATCAGGTTGACAATTGGCACTTGGAATGTTGCTGGAAGGCTTCCAAATGAGGATCTTGAGATTGAGGAGTGGCTCTGTATGCAAGAACCTGCAGATATTTACATTCTCGGTTTCCAAGAGGTGGTTCCTTTGAATGCTGGGAACGTACTTGGAGCAGAGGACAGTCAACCAATTCCAAAATGGGAGGCAATCATTCGTAGAACCTTGAATAAATCTTTTGAACCAGAATCCGAGTACAAAAGCTATAGTGCTCCAACCTCTCCTGTACTGAGGGCATCTTGTGTTGCTGATGCACTTAAAGAAGAGGTTGACAGTCCTACATTAGAGATGATGAACAATGAGACTGCAGCTCCCACTAACGGTTGTAACTTAGAAAGACACAAACTAAATGGTATGATTGGCACAGGGAAGAAATTCCAGCTAAGGAGATTATATGGTGGTGACAGCGACATTAGATTAGACTGGCCTGAATATTCATTAGATAAAGTCCCTCAAGTTCTCTCTAATTTGAAATTGCGGAGAGTATTGAGCAGCTCAGCAAGAGTTGGCTTTGGTTGGATGGAGACTCCTATAAATTTTAGTCCTCAAAAGGTCACATTGGATGGTGGGGGGATGAAAAGGTCATACCGTAGCTCTGGAAACCTAGGATTGATCTTCATGGAGCAGCAAGAGAGGTCTAAACTTTGTGATTATCTCTCTGATGTTTCTGACAGGTCTTCTGAAGAGGAAGATGAATCTCTTATTGAAATACCTGAACATCAATTCAAAGATGGAGAAAATAAAGATTGCATGAAGTCACGTCAGAGCTATGTGCGAATAGTTAGCAAGCAGATGGTAGGGATATACATATCAGTGTGGGTGCGAAAAAGGTTGAGGAGACATATAAACAACTTGAAAGTTTCTCCTGTTGGAGTCGGCCTTATGGGCTACATGGGAAACAAGGGATCAGTTTCTGTTAGCATGTCAGTTTTCCAAACTCGGATATGCTTTGTTTGCTCTCATCTGACTTCTGGTCACAAGGACGGTGATAAGCAGAGGCGTAATTCTGATGTTTATGAGATCTTAAGGCGTACCCAATTCTCATCTGTCATTGATGCTGATCAGCCAGAGACAATTCCTAGTCATGACCAGATATTCTGGTTTGGGGATTTAAACTACCGTCTCAATATGTTGGACGCAGAGATAAGGAAGCTTGTTGCTAGGAAAAAGTGGGATGAACTTATCAACAGTGATCAGCTGAGCAAAGAGCTAAGGAGTGGCCATGTATTTGAGGGATGGAAGGAGGGGGTGATAGACTTCCCACCCACATACAAGTATGAAATCAACTCTGATAGATACGTCGGAGAAAACCCAAAAGAGGGAGAGAAGAAAAGATCTCCAGCATGGTGTGATAGAATACTATGGTTAGGGAAAGGCATAAAGCAGCTCTGTTACAATCGAGCAGAGATAAGAGTTTCAGATCATCGTCCTGTTAGTTCAAATTTCATGGTTGAGGTTGAAGTTTTTGACCATCGGAAGCTTCAGAGGGCTCTCAAACCCACCGATGCAAGAGTACACCCAGAGATTTTCCTTGATGAATAG 1887 0.4293 MRTRQGKRSEAFWPSIVMKKWLNIKPKAYDFSEDEVDTETESEDDACSLKDARVQMGEDHACRMQRNQSVCTNQTSESKGYSSSHRRGKSETLRVHYINRKDIRLTIGTWNVAGRLPNEDLEIEEWLCMQEPADIYILGFQEVVPLNAGNVLGAEDSQPIPKWEAIIRRTLNKSFEPESEYKSYSAPTSPVLRASCVADALKEEVDSPTLEMMNNETAAPTNGCNLERHKLNGMIGTGKKFQLRRLYGGDSDIRLDWPEYSLDKVPQVLSNLKLRRVLSSSARVGFGWMETPINFSPQKVTLDGGGMKRSYRSSGNLGLIFMEQQERSKLCDYLSDVSDRSSEEEDESLIEIPEHQFKDGENKDCMKSRQSYVRIVSKQMVGIYISVWVRKRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSVFQTRICFVCSHLTSGHKDGDKQRRNSDVYEILRRTQFSSVIDADQPETIPSHDQIFWFGDLNYRLNMLDAEIRKLVARKKWDELINSDQLSKELRSGHVFEGWKEGVIDFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQLCYNRAEIRVSDHRPVSSNFMVEVEVFDHRKLQRALKPTDARVHPEIFLDE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0686 628 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 616 IPR045849 GO:0004445
Vvi2g0686 628 Gene3D Endonuclease/exonuclease/phosphatase 84 201 IPR036691 -
Vvi2g0686 628 SUPERFAMILY DNase I-like 366 615 IPR036691 -
Vvi2g0686 628 Gene3D Endonuclease/exonuclease/phosphatase 316 623 IPR036691 -
Vvi2g0686 628 FunFam Type I inositol polyphosphate 5-phosphatase 2 83 195 - -
Vvi2g0686 628 FunFam Type I inositol polyphosphate 5-phosphatase 2 307 623 - -
Vvi2g0686 628 SMART i5p_5 316 605 IPR000300 GO:0016791|GO:0046856
Vvi2g0686 628 SUPERFAMILY DNase I-like 95 186 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0686 Vvi-Chr2 6407684 6414500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0686 371 605 Acyl Lipid Metabolism Gene Families AT1G65580 33.213 1.90e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0686 K24221 - vvi:100267737 1248.03