Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0684 ATGGCGTCTCTGTCTTTGTCCGCTCCTTCTTACCATGCCGAATCGCTGGTTTCTCGCTACTCGCTCCGCCAGTCCAGCTTTCTCCCCAACGAGTCCCGTTATCGTTTCCAAGTCGCAAGCGTCATCAAATGTGACATGAATGAATCGTTGAAGTTTGAAAATGGGAAGCCTTGTGTTCCTGTCCTTAATGATCGAACATTTCCAAGCTTTTTGGAATCAAGGCGCATGGAGAAATCAGTTAGTAGGAATAGTGACCGGTTGAAAATATTCTCTGGCACAGCAAATCCCACACTTTCTAAGGAAATTGCTTGGTACATGGGTAAGGAGCTGGGAAAGATCAACATAAAGAGGTTTGCTGATGGTGAAATTTATGTTCAGTTGGAAGAGAGTGTTAGAGGGTGTGATGTTTACCTAGTGCAGCCGACCTGCCCTCCCGCTAATGAGAATCTTATGGAGCTTCTAATAATGATAGATGCTTGTCGAAGAGCATCGGCGAAAACTGTCACAGCAGTAGTTCCGTATTTTGGCTATGCCAGATCTGATAGAAAGACTCAAGGGCGTGAATCCATTGCAGCTAAACTTGTTGCAAATGTTATCACCAAAGCAGGTGCGGACCGTGTTCTTGCTTGTGATCTTCATTCTGGGCAGTCCATGGGTTACTTTGATATTCCTGTGGATCACATATATTGTCAGCCTGTGATTCTTGATTATCTTGCCAGCAAGACAATTTGTTGTAATGATTTGGTAGTGGTCTCACCTGATGTTGGAGGAGTTGCAAGAGCACGTGCTTTTGCAAAGAAGTTGTCTGATGCGCCTTTAGCCATAGTGGATAAAAGGCGTCAAGGACATAATGTTGCTGAGGTGATGAATCTGATTGGTGATGTCAAAGGAAAAGTTGCAGTCATGGTGGATGACATGATTGATACTGCTGGGACTATTACAAAAGGGGCAGCTCTGTTACATCAAGAGGGGGCCAGGGAAGTCTATGCCTGCTGTACTCATGCTGTTTTTAGCCCTCCTGCAATTGAGAGGCTGACAAGCGGCCTTTTTCAAGAGGTGATCATTACAAACACAATTCCAACGCAGGAGAAAAACTACTTCCCCCAGTTGACTGTTCTTTCAGTAGCAAACCTGCTGGGAGAAACCATCTGGCGTATACATGATGATTGTTCTGTGAGTAGCATTTTTCTGTGA 1194 0.4481 MASLSLSAPSYHAESLVSRYSLRQSSFLPNESRYRFQVASVIKCDMNESLKFENGKPCVPVLNDRTFPSFLESRRMEKSVSRNSDRLKIFSGTANPTLSKEIAWYMGKELGKINIKRFADGEIYVQLEESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKTVTAVVPYFGYARSDRKTQGRESIAAKLVANVITKAGADRVLACDLHSGQSMGYFDIPVDHIYCQPVILDYLASKTICCNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACCTHAVFSPPAIERLTSGLFQEVIITNTIPTQEKNYFPQLTVLSVANLLGETIWRIHDDCSVSSIFL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0684 397 SMART Pribosyltran_N_2 87 203 - -
Vvi2g0684 397 CDD PRTases_typeI 246 358 IPR000836 -
Vvi2g0684 397 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 211 226 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Vvi2g0684 397 FunFam Ribose-phosphate pyrophosphokinase 1 86 234 - -
Vvi2g0684 397 Gene3D - 90 388 IPR029057 -
Vvi2g0684 397 FunFam Ribose-phosphate pyrophosphokinase 235 373 - -
Vvi2g0684 397 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 87 397 IPR037515 GO:0004749
Vvi2g0684 397 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 86 396 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vvi2g0684 397 Pfam Phosphoribosyl synthetase-associated domain 288 396 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vvi2g0684 397 SUPERFAMILY PRTase-like 152 388 IPR029057 -
Vvi2g0684 397 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 87 203 IPR029099 -
Vvi2g0684 397 NCBIfam ribose-phosphate diphosphokinase 88 396 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vvi2g0684 397 Gene3D - 230 373 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0684 Vvi-Chr2 6378293 6383855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0684 K00948 - vvi:100260851 788.875