Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0682 ATGGTTTCATTTGAGATGAATGACCGGAAAAAGATTGGGCTAGGCTTGACAGCATTTGGTGTATTTTTCTCTTTCCTGGGTATCGTTTTCTTATTCGACAAGGGGTTGCTTGCGATGGGAAATATCCTCTTCATCTCAGGAGTGACATTAACCATCGGACTGAAATCCACTGTTCAATTCTTCATGAAACGTCAAAATTATAAGGGTACTATTTCTTTTGGTGTTGGCTTCTTCTTTGTTATCATAGGATGGCCTATCTTGGGTATGATGTTGGAGGCATATGGATTTATCGTGCTCTTCAGTGGCTTCTGGCCAACACTGGCTGTTTTTCTGCAGAAGATACCCTTTCTTGGTTGGGTATTCCAACAGCCATTTGTGAGATCGTTCTTTGATAAGTACCGAGGGAAACGCGTGCCTGTATAA 423 0.4184 MVSFEMNDRKKIGLGLTAFGVFFSFLGIVFLFDKGLLAMGNILFISGVTLTIGLKSTVQFFMKRQNYKGTISFGVGFFFVIIGWPILGMMLEAYGFIVLFSGFWPTLAVFLQKIPFLGWVFQQPFVRSFFDKYRGKRVPV* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0682 140 PANTHER CGI-141-RELATED/LIPASE CONTAINING PROTEIN 3 128 IPR045176 GO:0006888|GO:0042147
Vvi2g0682 140 Pfam Got1/Sft2-like family 16 115 IPR007305 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0682 Vvi-Chr2 6343990 6352110 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0682 - - vvi:100255785 272.322