Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0675 ATGCAAGCAAGGTTATATATTTGTGGACTTACCCTTCTTGTTCAAGTCGATGAAGTACAAGGCTTGCAAATAAAGAGAAATGGTAAATGGATACCGATAAGGCCTGTCCCTGGTGCATTCATCGTCAACATTGGCGACATTCTTGAGATAATGAGCAATGGGGAATACAAGAGCATAGAGCATAGAGCGGTGATGAACCCAGAGACGGAACGCCTCTCCATTGCAACATTCTGTTCTCCGAGTGTTGAGACAATCATTGGTCCTTTACCAGAGCTTACAAAGGAGAATAATGGTGCAATCTATAAATCTGTAGACTGGGATGAGTATTTAAAGTTTGCACTAAGTAGGGAACTTGATGGTAAAAGTGCAATCAATCATATGAAGTTGGAGAACTGA 396 0.4116 MQARLYICGLTLLVQVDEVQGLQIKRNGKWIPIRPVPGAFIVNIGDILEIMSNGEYKSIEHRAVMNPETERLSIATFCSPSVETIIGPLPELTKENNGAIYKSVDWDEYLKFALSRELDGKSAINHMKLEN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0675 131 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 9 109 - -
Vvi2g0675 131 SUPERFAMILY Clavaminate synthase-like 9 121 - -
Vvi2g0675 131 Gene3D - 7 131 IPR027443 -
Vvi2g0675 131 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 1 80 IPR005123 -
Vvi2g0675 131 Pfam 2OG-Fe(II) oxygenase superfamily 10 80 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0675 Vvi-Chr2 6209000 6209468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0675 10 129 Glycosyltransferase AT5G59530 36.585 1.82e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0675 - - vvi:100248938 214.542