Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0674 ATGAAGGCAGTTGTTCAAGAGTTCTTTAAATTGCCACTAAAGGAGAAGAATGCATATGCAAAACTACCAAATGGGGTTGAAGGTTATGGCCAACACTTTGTTGTTTCCCAAGACCAGAAGCTGGATTGGGCTGATATACTTTTTCTTCAATGCCTGCCAGCCTCCGAAAGAAAAATGAGGTTCTGGCCTCAAGAACCCATTTCTTTCAGGCAACCTTAG 219 0.4247 MKAVVQEFFKLPLKEKNAYAKLPNGVEGYGQHFVVSQDQKLDWADILFLQCLPASERKMRFWPQEPISFRQP* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0674 72 SUPERFAMILY Clavaminate synthase-like 1 71 - -
Vvi2g0674 72 Pfam non-haem dioxygenase in morphine synthesis N-terminal 2 65 IPR026992 -
Vvi2g0674 72 Gene3D - 1 72 IPR027443 -
Vvi2g0674 72 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0674 Vvi-Chr2 6208527 6208852 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0674 - - vvi:100248938 139.043