Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0672 ATGGTGGGTTCGCTTCCAGTTGCAAATGTCCAAGCTCTTGCTTCCAGCTACTCCGGTGATGTGCCACTCCGGTACCTACGGCCGGAACTCCTCTCAGAAGAAGTTTTGGTGGATGAGTCTCTTCAAATTCCCACCGTAGATATGAGGAAGCTCCTGGTTGATGATGATGAAATGAGTAAACTTCACTTGGCCTGTAAAGAATGGGGTTTCTTTCAGTTAATAAATCATGGGGCAGCCGAAGAAGTAATTGAGAAAATGAAGGCAGATGTTCAAGAATTCTTTAAATTGCCACTAAAGGAGAAGAATGCATATGCGAAACTACCAAATGGGGTTGAAGGTTATGGCCAAAACTTTGTTGTTTCCGAAGACCAGAAGCTTGATTGGGCTGATATGCACTTTCTTCAATCCCTGCCAGCCTCTGAAAGAAATATGAGGTTCTGGCCTGAAGAACCCACTTCTTTCAGGGGAACTTTGGAAAAGTACTCATTGGAGCTTGTAAAAGTTTCAAACTGCCTTCTGAAGTTGATGGCTAAGAACCTTTTGATAAATCCTGAGCAGCTCACAAATATGTTTGACGTTGGAAGACAAGCAGTGAGAATGAATTACTATCCGCCTTGTGTGCATGCAAGCAAGGTAATAGGTCTCACTCCCCACTCAGATTTCGGAGGACTTACCCTACTTGTTCAAGTCAATGAAGTGCAAGGCTTGCAAATTAAGAGAAATGGTAAATGGATACCAATTAGGCCTGTCCCTGGTGCGTTTATCGTCAACATTGGTGACGCTATTGAGGCCCTTGCAGCTGAGATGGGCCCAGACACTCGTGTAAATTGTGCTGCGCCTGGTTTTGTACCAACACACTTTGCCGAATTCCTCACGAAAAATGCTGAGATTAAGAAGGGCATTGAGGATAAAACTCTACTAAACAGGCTTGGAACCACCAAGGATATGGCTGCAGCCACGGCCTTCCTGGCTTCCGACGATGCTTCTTATATCACTGGAGAGACGCTGGTAGTGGCTGGTGGAATACCTTCTAGACTCTAG 1041 0.4515 MVGSLPVANVQALASSYSGDVPLRYLRPELLSEEVLVDESLQIPTVDMRKLLVDDDEMSKLHLACKEWGFFQLINHGAAEEVIEKMKADVQEFFKLPLKEKNAYAKLPNGVEGYGQNFVVSEDQKLDWADMHFLQSLPASERNMRFWPEEPTSFRGTLEKYSLELVKVSNCLLKLMAKNLLINPEQLTNMFDVGRQAVRMNYYPPCVHASKVIGLTPHSDFGGLTLLVQVNEVQGLQIKRNGKWIPIRPVPGAFIVNIGDAIEALAAEMGPDTRVNCAAPGFVPTHFAEFLTKNAEIKKGIEDKTLLNRLGTTKDMAAATAFLASDDASYITGETLVVAGGIPSRL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0672 346 Gene3D - 5 273 IPR027443 -
Vvi2g0672 346 Pfam Enoyl-(Acyl carrier protein) reductase 263 342 - -
Vvi2g0672 346 Pfam 2OG-Fe(II) oxygenase superfamily 196 264 IPR044861 -
Vvi2g0672 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 263 342 IPR036291 -
Vvi2g0672 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 325 IPR005123 -
Vvi2g0672 346 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 41 265 - -
Vvi2g0672 346 PRINTS Glucose/ribitol dehydrogenase family signature 271 288 IPR002347 -
Vvi2g0672 346 PRINTS Glucose/ribitol dehydrogenase family signature 306 326 IPR002347 -
Vvi2g0672 346 SUPERFAMILY Clavaminate synthase-like 6 265 - -
Vvi2g0672 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 150 IPR026992 -
Vvi2g0672 346 FunFam Protein SRG1 5 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0672 Vvi-Chr2 6193720 6198659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0672 263 346 Miscellaneous Gene Families AT4G05530 79.762 6.16e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0672 - - vvi:100245473 528.094