Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0671 ATGGTGGGTGGAGAGATTAGCAGAGAGTTGGGAGGTTCAGTTCTAGTGGCAAATGTCCAAGCCCTTGCTTCCAGCTACTCCGGTGATGTGCCACTCCGATATCTCAGGCCGGAGCTCCACGCAGAAGAAGTTCTGGTGGATGAGTCTCTTCCAATTCCCACCATAGATATGAGGAAGCTCTTGGTTGATGATGATGAAATGGGTAAACTTCACTTGGCCTGTAAAGAATGGGGTTTCTTTCAGTTAATAAACCATGAGGTAGCAGAAGTAATTGAGAAAATGAAGGCAGATGTTCAAGAATTCTTTAAATTGCCACAAAAGAAGAAGAACGAATATGCGAAACTACCAAGTGGTGTTGACGGTTATGGCCAAAACTTTGTTGTTTCCGAAGACCAGAAGCTTGATTGGGCTGATATGCTCTTTCTTCAATGCCTTCCAGCCTCTGAAAGAAATATGAGGTTCTGGCCTGATGAACCCACTTCTTTCAGGGAAACTTTGGTCAAATACTCATCGGAGCTTGTAAAAGTTTCAAACTGCCTTCTGAAGTTGATGGCCAAGAACCTTGAGATAAATCCTGAGCAGTTCACAAATATGTTTGAGGATGGAAGACAATCAGTGAGAATGAATTACTATCCACCTTGTGTGCATGCAAGCAAGGTAATAGGTTTCACTCCCCACTCAGATCCCGGAGGACTTACCCTACTTGTTCAACTCAATGAAGTGCAAGGCTTGCAAATTAAGAAAAATGGTAAATGGATACCAATTAGTCCTGTCCCTGGTGCATTTATCGTCAACATTGGTGACGTTATTGAGATAATGAGCAATGGGGAATATAAGAGCATAGAGCATAGAGCAGTGGTGGACCCAGAAAAGGAACGGCTCTCCATTGCAATATTCTGTTCTCCGGGTGCTGGTGCAATCATTGGTCCTTTACCAGAGCTTACAAAGGAGAAAGGTGCAATCTATAAATCTGTAAGCAGGGAGGAGTATATAAAATTTGTACTAAGCAAGTGCATGAGTTTTGACACAGCACAAACATGA 1041 0.4294 MVGGEISRELGGSVLVANVQALASSYSGDVPLRYLRPELHAEEVLVDESLPIPTIDMRKLLVDDDEMGKLHLACKEWGFFQLINHEVAEVIEKMKADVQEFFKLPQKKKNEYAKLPSGVDGYGQNFVVSEDQKLDWADMLFLQCLPASERNMRFWPDEPTSFRETLVKYSSELVKVSNCLLKLMAKNLEINPEQFTNMFEDGRQSVRMNYYPPCVHASKVIGFTPHSDPGGLTLLVQLNEVQGLQIKKNGKWIPISPVPGAFIVNIGDVIEIMSNGEYKSIEHRAVVDPEKERLSIAIFCSPGAGAIIGPLPELTKEKGAIYKSVSREEYIKFVLSKCMSFDTAQT* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0671 346 Pfam 2OG-Fe(II) oxygenase superfamily 205 302 IPR044861 -
Vvi2g0671 346 FunFam Protein SRG1 14 340 - -
Vvi2g0671 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 158 IPR026992 -
Vvi2g0671 346 Gene3D - 14 339 IPR027443 -
Vvi2g0671 346 SUPERFAMILY Clavaminate synthase-like 16 338 - -
Vvi2g0671 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 302 IPR005123 -
Vvi2g0671 346 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 50 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0671 Vvi-Chr2 6184237 6187378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0671 50 330 Glycosyltransferase AT5G59530 32.450 3.83e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0671 - - vvi:100260905 677.552