Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0670 ATGGTGGGTGAAGAGATGAGCAGAGAGTTGGGAGGTTCGGTTCTAGTGGAAAATGTCCAAGCCCTTGCTTCCAGCTACTCCGGTGATGTGCCACTCCGGTACCTCCTGCCGGAACTCCACGCAGAAGAAGTTTTGGTGGATGAGTCTCTTCCAATTCCCACCATAGATATGAGGAAGCTCTTGGTTGATGATGATGAAATGGGTAAACTTCACTTGGCCTGTAAAGAATGGGGTTTCTTTCAGTTAATAAATCATGGGGTAGCAGAAGAAGTAATTAAGAAAATGAAGGCAGATGTTCAAGAATTCTTTAAATTGCCACTAAAGGAGAAGAATGCATATGCAAAACTCGGAAATGGGCTTGAAGGTTATGGCCAAAACTTTGTTGTTTCCGAAGACCAGAAGCTTGATTGGGCTGATATGCTCTTTCTTCAATGCCTGCCAGCCTCTGAAAGAAATATGAGGTTCTGGCCTGAAGAACCCACTTCTTTCAGGGAAACTTTGGAAAAGTATTCATCAGAGCTTGTAAAAGTTTCAAACTGCCTTCTGAAGTTGATGGCTAAGAACCTTTTGATAAATCCTGAGCAACTCACAAATATGTTTGACGATGGAAGACAAGCAGTGAGAATGAATTACTATCCACCTTGTGTGCATGCAAGCAAGGTAATAGGTTTCACTCCCCACTCAGATCCTGGTGGACTTACCCTGTTTGTTCAAGTCAATGAAGTGCAAGGCTTGCAAATTAAGAGAAATGGTAAATGGATACCAATTAGGCCTGTCCCTGGTGCATTTATCGTCAACATTGGTGACGTTATTGAGATAATGAGCAATGGGGAATATAAGAGCATAGAGCATAGAGCAGTGGTGGACCCAGAAAAGGAACGACTCTCCATTGCAACATTCTGTTCTCCGGGTGCTGGTGCAATCATTGGTCCTTTACCAGAGCTTACAAAGGAGAAAGGTGCGATCTATAAATCTGTAAGCAGGGAGGAGTATATAAAATTTGTACTAAGTAGGAAACTTGATGGCAAAAGTACAATAAATCTTATGAAGTTGGAGAACTGA 1062 0.4237 MVGEEMSRELGGSVLVENVQALASSYSGDVPLRYLLPELHAEEVLVDESLPIPTIDMRKLLVDDDEMGKLHLACKEWGFFQLINHGVAEEVIKKMKADVQEFFKLPLKEKNAYAKLGNGLEGYGQNFVVSEDQKLDWADMLFLQCLPASERNMRFWPEEPTSFRETLEKYSSELVKVSNCLLKLMAKNLLINPEQLTNMFDDGRQAVRMNYYPPCVHASKVIGFTPHSDPGGLTLFVQVNEVQGLQIKRNGKWIPIRPVPGAFIVNIGDVIEIMSNGEYKSIEHRAVVDPEKERLSIATFCSPGAGAIIGPLPELTKEKGAIYKSVSREEYIKFVLSRKLDGKSTINLMKLEN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0670 353 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 50 330 - -
Vvi2g0670 353 Pfam 2OG-Fe(II) oxygenase superfamily 205 303 IPR044861 -
Vvi2g0670 353 SUPERFAMILY Clavaminate synthase-like 16 343 - -
Vvi2g0670 353 FunFam Protein SRG1 14 342 - -
Vvi2g0670 353 Gene3D - 13 341 IPR027443 -
Vvi2g0670 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 159 IPR026992 -
Vvi2g0670 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 303 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0670 Vvi-Chr2 6174349 6176342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0670 17 351 Glycosyltransferase AT5G59530 29.577 7.73e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0670 - - vvi:100255836 709.523