Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0666 ATGAGCACTAGAAAGGATTTTGGTGGCTCTCTCCCTGTTGCAAATGTCCAAGCTCTTGCTTCCGACAATTCTGGTGACATACCAATCCGGGACCTCCGGGCAGAACTCCAGTCAGAAGAAGTTTTGGTGGATGAGTCTCCCCACATTCCCATCATAGATATGAGGAAGCTCATGGTTGATGATGATGAAATGGAAAAACTCCATTTTGCCTGTAAAGATTGGGGCTTCTTTCAGTTAATCAATCATGGGGTGGAAGAAGTAATTGAGAAAATGAAGATGGATGTCCAAGAATTCTTTAAGTTACCTCTAGAGGAGAAGAATGCTTATGCACAGCCACCAAATAACATTGAAGGTTATGGTCAAGCCTTTGTTGTTTCTCAAGACCAGAAGCTTGATTGGGGTGACATGCTTTTCCTTTTTCCTCTGCCAGCCTCTCTAAGAAATATGAGACTATGGCCTGAGAATCCCACTTCTTTCAGGGAAACATTGGACAATTACTCCTCAGAGCTGCATAGAGTTTCAATCAACCTTCTGAGGTCAATGGCCAAGAACCTGGGGGTAAATCCCGACAAGCTTGCAAGCATGTTTGAGGATGGCACACAGGGAGTTAGGATGAATTATTATCCACCTTGTGTGCATGCAGACAAGGTTATGGGCCTCACTCCCCACTCTGATGCCACAGGACTCACCCTACTAGTTCAAGTCAATGAAGTGCAAGGTCTGCAAATCAAGAAAAATGGCAAATGGGTTCCCATTAAACCTGTCCCTGATGGATTAGTTGTCAACATTGGTGACATCATTGAGATCATGAGCAATGGGGAATACAAGAGCATAGAGCACAGAGCGGTGGTGAATCCAGAAAAAGAACGCCTCTCCATTGCCGCATTTCACAGTCCAGATCATAGGACCATGATTGGTCCTCTGCCAGACCTTATAAAAGAGAACAGCGCAAACTATAAGACTACAAGTCATGATGACTTTCTACGAATTGTTGTAACCAGAAAACTTGATGGTAAGAGTTTATTAGGACAAATGAAATTTGCAGATTGA 1050 0.4352 MSTRKDFGGSLPVANVQALASDNSGDIPIRDLRAELQSEEVLVDESPHIPIIDMRKLMVDDDEMEKLHFACKDWGFFQLINHGVEEVIEKMKMDVQEFFKLPLEEKNAYAQPPNNIEGYGQAFVVSQDQKLDWGDMLFLFPLPASLRNMRLWPENPTSFRETLDNYSSELHRVSINLLRSMAKNLGVNPDKLASMFEDGTQGVRMNYYPPCVHADKVMGLTPHSDATGLTLLVQVNEVQGLQIKKNGKWVPIKPVPDGLVVNIGDIIEIMSNGEYKSIEHRAVVNPEKERLSIAAFHSPDHRTMIGPLPDLIKENSANYKTTSHDDFLRIVVTRKLDGKSLLGQMKFAD* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0666 349 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 199 299 IPR005123 -
Vvi2g0666 349 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 47 321 - -
Vvi2g0666 349 Gene3D - 11 337 IPR027443 -
Vvi2g0666 349 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 155 IPR026992 -
Vvi2g0666 349 SUPERFAMILY Clavaminate synthase-like 12 339 - -
Vvi2g0666 349 FunFam Protein SRG1 11 338 - -
Vvi2g0666 349 Pfam 2OG-Fe(II) oxygenase superfamily 203 299 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0666 Vvi-Chr2 6113176 6119879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0666 49 346 Glycosyltransferase AT5G59530 32.381 9.98e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0666 - - vri:117926908 681.019