Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0662 ATGGACTCCACACCCACCAGACAACCATATTTCATCGAAGAAGAGGACGATACTCAGGCTTCTCTATCAGATATGGAGGCTGGATTCTCTGGCAACCACCTTTTCTTCTCTAGGTCCCACAGTGCTCCTCACAGGAGAGGTAGTTTGAGAAACCTCTCTTTTTTCAGCGCTTCTTCTCCGAGATCTGCCAGGTTTTATGATGCTAGATTTGAAGATCATCAACCCCATTTTCTTGAAGCTTGTTTTCTTTGCAACAAACCCCTTGGCGATAACAGAGATATTTACATGTACAGGGGGGACACTCCATTCTGTAGCGAAGAGTGCAGACAAGAGCAGATAGAGATGGATGAGGCCACAGAGAAGAACCGGAGTATTTCTTCCATTAAGGCCTTTAGAAAAGAGCAGAAAACGTCGTCAACTCCAAGCAAATCTCAGAACTATCCTTTCAGAACAGGCACAGTGGCAGCCGCTTAA 474 0.4557 MDSTPTRQPYFIEEEDDTQASLSDMEAGFSGNHLFFSRSHSAPHRRGSLRNLSFFSASSPRSARFYDARFEDHQPHFLEACFLCNKPLGDNRDIYMYRGDTPFCSEECRQEQIEMDEATEKNRSISSIKAFRKEQKTSSTPSKSQNYPFRTGTVAAA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0662 157 Pfam zinc-finger of the FCS-type, C2-C2 68 118 IPR007650 -
Vvi2g0662 157 MobiDBLite consensus disorder prediction 116 130 - -
Vvi2g0662 157 ProSiteProfiles Zinc finger FLZ-type profile. 76 120 IPR007650 -
Vvi2g0662 157 MobiDBLite consensus disorder prediction 116 157 - -
Vvi2g0662 157 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 41 156 IPR044533 -
Vvi2g0662 157 MobiDBLite consensus disorder prediction 131 151 - -
Vvi2g0662 157 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0662 Vvi-Chr2 5999840 6000845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0662 - - vvi:100257499 320.087