Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0659 ATGCCGATTGTGATTGTTTACGTATGGGTTGTGTATCTCAGTGTGCAGGCTATTGGACCAGAGCTTACATTTTACAATGCATCAAAAGATGTGGGGGTATCACCTTTCCTGTCAAACAAACTTTTGCATGCTCAATTGGATGCATTCTGCAGGCTTGTTTTGAAGGGCAATACTGTCGAAATGAGTGCAAATGCACTTGGATTAACAATGGAGAGCAATGGAATCAGAATTTTAGAGCCTTTCGACACCTCCATAAAGTTTTCAAATGTTTCTGGAAAGACCAACATGCATTTAGCTGTTTCAGACATATTCATGAATTTTTCATTCAGTACCTTGAGACTGTTCTTAGCGGTTGAGGAGGATATTTTAGCGTTTCTAAGAATGACATCAAAGAAGATGACAGAGGTCTGCTTACAGTTCGACAAAGTTGGAACAATTGAAAGTAGGGACAAGCCACCTACAAAAGGAGTTGTAGCTGTAAATACCAGCTTTGCAAAAGTGAAAAGACCTGTATCTTTCAAGCTAATATGGCCACCTTCAGCTTCTGAAGAAATTTCTGGTTCCCTTGGCATTGACAATGTAATGCCAAATCCTGTGCTTGGAGAAGGAGAGAGTAACTGCTCCATTTGGTTCCCTGAAGCACCTGATGGTTATGTTGCATTGGGGTGTGTGGTTTCCCCTGGAAGGACACGGCCCCCGCTATCTTCTGCTTTCTGCATCCTGGCTTCTTTAGTTTCTCCCTGTGCGTTGAGAGATTGTATCACTATTGGCTCAGGCAATATGTCCCATTCAAGATTGGCATTCTGGCGTGTGGATAACTCTGTTCGTACTTTCATACCAATGGATGCCTCTCATTTGCATTTAACAGTTAGAGCATATGAACTTCGCCATTTTTTCTTTAGGCTTCCAGAAGTCTCTCCAAAAGCATCTAAAAGTTCAGACCAAGCCTCTCCTTCTGGTGAAGTTCATGCTCTACAATCAGAAAGGCCAGCAGCGGCAAGCTCTGGTTGCCATTTAGAGGCTATTGCTAGTTTTCATTTGATATGGTGGAATCAAAACTCAAGCTCAAGAAAGAAACTATCGATATGGCGTCCAGTGGTCCCTCGAGGGATGGTATATTTTGGAGATATCGCTGTTCAAGGGTATGAGCCTCCGAATACCTGCATTGTTGTCCATGATACTGGAGATGACGAACTTTTCAAAGCCCCTCTTGATTTTCAACTTGTTGGTCAGATCAAGAAACAAAGGGGGATGGAGAGTATTTCTTTTTGGCTGCCTCAAGCTCCACCTGGCTTTGTTTCCCTGGGTTGTATTGCATGCAAGGGCACACCCAAGCCAAATGATTTCAGCTCATTAAGGTGCATAAGAAGTGATATGGTTACAGGAGATCAATTTTTGGAAGAAAGTGTATGGGATACATCTGATGCCAAGCATACAAAAGAACCATTTAGCATTTGGGCAGTTGGTAATGACTTAGGGACCTTTGTTGTTCGCAGTGGTTTCAAAAAACCTCCCAAAAGGTTTGCTCTGAAACTTGCAGATCCAAACATACCAAGTGGTTCAGATGATACTGTCATTGATGCAGAAATTAGTACCTTCTCAGCGGTACTTTTTGATGATTATGGTGGCCTGTTGTTGGCAAAAACTTAA 1650 0.4236 MPIVIVYVWVVYLSVQAIGPELTFYNASKDVGVSPFLSNKLLHAQLDAFCRLVLKGNTVEMSANALGLTMESNGIRILEPFDTSIKFSNVSGKTNMHLAVSDIFMNFSFSTLRLFLAVEEDILAFLRMTSKKMTEVCLQFDKVGTIESRDKPPTKGVVAVNTSFAKVKRPVSFKLIWPPSASEEISGSLGIDNVMPNPVLGEGESNCSIWFPEAPDGYVALGCVVSPGRTRPPLSSAFCILASLVSPCALRDCITIGSGNMSHSRLAFWRVDNSVRTFIPMDASHLHLTVRAYELRHFFFRLPEVSPKASKSSDQASPSGEVHALQSERPAAASSGCHLEAIASFHLIWWNQNSSSRKKLSIWRPVVPRGMVYFGDIAVQGYEPPNTCIVVHDTGDDELFKAPLDFQLVGQIKKQRGMESISFWLPQAPPGFVSLGCIACKGTPKPNDFSSLRCIRSDMVTGDQFLEESVWDTSDAKHTKEPFSIWAVGNDLGTFVVRSGFKKPPKRFALKLADPNIPSGSDDTVIDAEISTFSAVLFDDYGGLLLAKT* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0659 549 Pfam Vacuolar protein sorting-associated protein 62 338 488 IPR009291 -
Vvi2g0659 549 Pfam Vacuolar protein sorting-associated protein 62 140 275 IPR009291 -
Vvi2g0659 549 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 62-RELATED 339 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0659 Vvi-Chr2 5887055 5890114 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0659 K19525 - vvi:100260794 1061.21