Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0657 ATGGACGGTCTGATCAAGGGCTTGATCGATGTTGCTCTCGGCGCTGTCGGCAACGACGACGACGGCGACCACCGCTCTGGATCCCAAAACCCAGATGAACGCTCCAGATCCACTTGGTCCCAGGTGGTGTCAGGGGAGGAGGATAAGGGTGAAGAAGAGAACAGCGGCCGTAGACAGGGCCATCATCGGAGTCAGTGGAACAGAGAGGAAGGGAAATTGGGGCAGACTGAGGAGTGGGAGATCGCTGGTTCCAGACCTTCCAGGCGCCCCCAAAAGGCTGTGCATGAGGGGTATGAAAAGGATGAATATGGTGGGCAACATGATAATAACCAAAATTATTGGAAGCAAAAGGAGGAGAAAGAAGAAAGCAATGATGGTTGGGAGACTGTTGGCAAAAAGCCTCCAAGGAGACCACAAAAGGTAAAGATGGATCATTGGAATAAGTACAAGCAGCCAGCTAGCGGACAAGAATACTCTGATGAGATTGAAGATGGTATTAACATAGAACCCTCAGAAGAGGAGCTTGATGACATTTCACAAGCTTGCAACAAGCTCTGGAAACTTGATTTAAACCGTCTGGTACCTGGAAAGGACTATCAAATTGACTGTGGTGAAGGAAAGAAGGTTTACCAAAAGGAAGATATGGCACAAGGAAGCCTATTTTACTGGCTGAATGAAGATGTATTCAGGAGGCCTACCTTTTCTCGTTTCTGTTCTCTTCTAGATAATTATAACCCACATGAAGGTTATAAAGAAGTCATCACATCTGAAGAGAGGCAAGAGGAAGCTGCATTTATAGAAGAAATCAGTAGGACTGCACCAATCAAATATCTTTTCAAGTACCTCTCAGCAAAGGGTATTGTGTCTGAGAACTATCAAGATTTTAAAAGGACGATGACAAATCTCTGGTTTGATCTTTATGGTCGTGGTGGTACTTCCAGTTGCTCATCTGCTTTTGAACATGTTTTCGTTGGAGAAATCAAGAATCGTGGGGAACAGGAAGTTTCTGGATTCCATAACTGGCTTCAGTTTTACCTAGAAGAAGCAAAAGGGAGGGTTGATTACCAAGGTTACATTTTTCCCAGAAGACGTGGGCAGACACCAGACTCTGAAACCCAGCTGCTTACAATTCAGTTTGAATGGAATGGCGTTCTCAAGTCTGTCTCAAGCACTTTGGTTGGAGTGAGCCCAGAGTTTGAAATTGCCCTCTACACCCTGTGCTTCTATGTGGGTGGAGAGGACAACCAAGTTCAGTTGGGTCCATATCCAGTAAACATCAAGTGCTATCGCTTTGGAAACAAAATTGGGTCTGTGTTTCCAATAGCTGAGTGTTGA 1335 0.4532 MDGLIKGLIDVALGAVGNDDDGDHRSGSQNPDERSRSTWSQVVSGEEDKGEEENSGRRQGHHRSQWNREEGKLGQTEEWEIAGSRPSRRPQKAVHEGYEKDEYGGQHDNNQNYWKQKEEKEESNDGWETVGKKPPRRPQKVKMDHWNKYKQPASGQEYSDEIEDGINIEPSEEELDDISQACNKLWKLDLNRLVPGKDYQIDCGEGKKVYQKEDMAQGSLFYWLNEDVFRRPTFSRFCSLLDNYNPHEGYKEVITSEERQEEAAFIEEISRTAPIKYLFKYLSAKGIVSENYQDFKRTMTNLWFDLYGRGGTSSCSSAFEHVFVGEIKNRGEQEVSGFHNWLQFYLEEAKGRVDYQGYIFPRRRGQTPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYVGGEDNQVQLGPYPVNIKCYRFGNKIGSVFPIAEC* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0657 444 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 174 444 IPR018998 GO:0004521
Vvi2g0657 444 MobiDBLite consensus disorder prediction 45 141 - -
Vvi2g0657 444 MobiDBLite consensus disorder prediction 17 31 - -
Vvi2g0657 444 Pfam Endoribonuclease XendoU 178 440 IPR018998 GO:0004521
Vvi2g0657 444 SUPERFAMILY EndoU-like 176 442 IPR037227 -
Vvi2g0657 444 PANTHER PLACENTAL PROTEIN 11-RELATED 108 444 IPR039787 GO:0004521
Vvi2g0657 444 CDD XendoU 174 440 IPR018998 GO:0004521
Vvi2g0657 444 MobiDBLite consensus disorder prediction 14 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0657 K14648 - vvi:100252369 928.702