Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0650 ATGCATCTGAAGAAATCTCAGGCACGGATCGGAGAAGAAAGCAGTGGCGTCTCTTCCGATTACAACCCAACCCCACCACGATTTCCTCCTCCTCCAATTCAGTTTCAGACCCATTCGATACAACAGAGCAAAACTCATCTCCCCCCAAATCAGCCACAAGCTCACGCCCGAATCTCTTCTTCTCAATACCCGTCGAAGCAAACCCATCAACATCAAAGTCATCACCAAACCCAATTTCATGAGCATCCATCCACGCCCAAAACCATTCTTTCGCATCCCCACAAGAGGCCTATAATGACTCAAATGCCCTCTGCTCTTTCCCATTCCCCAACGCTGTCCTCTCTTAATCACAACCACCGCCATCACCACCAGCATCAGACACAATTGGATTCGCCGCTCCCATCTGCTTCTCAGTTGTTTGTTTGTACTTCTTTGGTCGCATTCGCAAAGGCATTGGCTTTCAAGCTCTTACACCATTTTCGCAATGCGGGTTCCTTGCGAATCCACTTGCGGGTTTTTATTTTACTTTCTCTGCCACCCCTTTACTTCTTCACTTGGAGCCCTCGCCGCTCGCTGGTGCTCGATTTCTTATCGGCGCTCGCTTTCTCGGCGGCTGTAGTGATTTCCCTCAATCTCGCGCTGCCTAGGCTGCCCTCAATTCGCGTGTTTCTTGCGCGCTCGCTCCCAATTAAGCTTTGTTCGTCGGCTTCTTCTGCGTCGAAACCTTCTCAACCCGTGCTTTGGTCTATTGGATCAAAGCCCAAATCGGAGAAGAGGACAAATTCGGGTTCTTGGGTGCAAGTGTATACCAATGGGGATGTGTATGAGGGTGAATTTCACAAAGGGAAGTGTTCAGGAAGTGGGGTTTATTATTATTATATGAGTGGGAGGTATGAGGGGGATTGGGTTGATGAGAAGTATGATGGGTATGGTGTTGAGACTTGGGCGAAAGGGAGTCGATTCCGGGGGCAATATAGGCAGGGTTTAAGACATGGGATTGGAGTGTATAGGTTTTACACTGGTGATGTTTATGCTGGAGAATGGTCGAATGGGCAGACTCATGGCTGCGGAGTTCACACTTGTGAGGATGGGAGCCGGTATGTGGGGGAGTTCAAGTGGGGTGTCAAACATGGGTTTGGTCATTACCATTTCAGAAATGGCGACATGTATGCTGGAGAATATTTTGCTGACAAGATGCATGGTTTTGGGGTATACCGATTTGCAAATGGACATCGATACGAGGGAGCCTGGCACGAGGGAAGAAGACAGGGGCTTGGTATGTATACTTTCAGAAATGGGGAGGCTCAGTCTGGTCACTGGCAAAATGGGGTTCTTGATGTTCCTAGCACTCAGAACACCCATCCTGCATCTCCTTTTGCTGTTAGCCATTCCAAAGTTCTGAATGCAGTCCAGGAGGCCCGACGTGCTGCTGAGAAAGCATTTGATGTCTCAAAAGTGGATGAGAGGGTGAACAAAGCCGTAGCATTGGCAAACAAAGCAGCTAACGCAGCAAGAGTTGCAGCTGTAAAGGCCGTACAAAAGAGAGTGCATCATAACAGTGACAGTAGTGACACACCATTACCAATTGTCTGA 1593 0.4878 MHLKKSQARIGEESSGVSSDYNPTPPRFPPPPIQFQTHSIQQSKTHLPPNQPQAHARISSSQYPSKQTHQHQSHHQTQFHEHPSTPKTILSHPHKRPIMTQMPSALSHSPTLSSLNHNHRHHHQHQTQLDSPLPSASQLFVCTSLVAFAKALAFKLLHHFRNAGSLRIHLRVFILLSLPPLYFFTWSPRRSLVLDFLSALAFSAAVVISLNLALPRLPSIRVFLARSLPIKLCSSASSASKPSQPVLWSIGSKPKSEKRTNSGSWVQVYTNGDVYEGEFHKGKCSGSGVYYYYMSGRYEGDWVDEKYDGYGVETWAKGSRFRGQYRQGLRHGIGVYRFYTGDVYAGEWSNGQTHGCGVHTCEDGSRYVGEFKWGVKHGFGHYHFRNGDMYAGEYFADKMHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGEAQSGHWQNGVLDVPSTQNTHPASPFAVSHSKVLNAVQEARRAAEKAFDVSKVDERVNKAVALANKAANAARVAAVKAVQKRVHHNSDSSDTPLPIV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0650 530 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 318 443 - -
Vvi2g0650 530 SMART morn 388 409 IPR003409 -
Vvi2g0650 530 SMART morn 365 386 IPR003409 -
Vvi2g0650 530 SMART morn 411 432 IPR003409 -
Vvi2g0650 530 SMART morn 319 340 IPR003409 -
Vvi2g0650 530 SMART morn 296 317 IPR003409 -
Vvi2g0650 530 SMART morn 273 294 IPR003409 -
Vvi2g0650 530 SMART morn 342 363 IPR003409 -
Vvi2g0650 530 MobiDBLite consensus disorder prediction 34 72 - -
Vvi2g0650 530 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 55 483 - -
Vvi2g0650 530 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 258 303 - -
Vvi2g0650 530 MobiDBLite consensus disorder prediction 104 130 - -
Vvi2g0650 530 MobiDBLite consensus disorder prediction 1 92 - -
Vvi2g0650 530 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 350 395 - -
Vvi2g0650 530 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 396 441 - -
Vvi2g0650 530 Pfam MORN repeat 390 412 IPR003409 -
Vvi2g0650 530 Pfam MORN repeat 298 320 IPR003409 -
Vvi2g0650 530 Pfam MORN repeat 344 366 IPR003409 -
Vvi2g0650 530 Pfam MORN repeat 321 343 IPR003409 -
Vvi2g0650 530 Pfam MORN repeat 413 433 IPR003409 -
Vvi2g0650 530 Pfam MORN repeat 275 294 IPR003409 -
Vvi2g0650 530 Pfam MORN repeat 367 389 IPR003409 -
Vvi2g0650 530 Gene3D - 305 349 - -
Vvi2g0650 530 Gene3D - 350 395 - -
Vvi2g0650 530 Gene3D - 256 304 - -
Vvi2g0650 530 Gene3D - 396 466 - -
Vvi2g0650 530 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 304 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0650 Vvi-Chr2 5708947 5713669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0650 318 445 Acyl Lipid Metabolism Gene Families AT2G41210 39.062 1.25e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0650 - - vvi:100854975 994.186