Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0647 ATGGATTTCTCGGAGCAAGACGTGGACAACTTCGGAGGAGATGGAGCCCGCCAATCGTCATCATCGTCGTCGTCGTCTTCCTCTTCATCAAGATCTTCGTCCAACGGCAGCGACGGCGGCGAGACCAGCAGCGCCGGCAGTGGCAGCGGCAGCGCAAGCGCAAGCGCAAGCAGCAGCGAAGGAGAAGATAACGGCGAAGAAGTGGACAAGAGGACTCATGGGTACGAGGAGAGAGATCTCTTTGGCTCTGATAGTGATGAGAAGGATCTGTTTGGCTCTGATAATGAAGATTACTGCAAAACCCTAGCTATTAGCCCTTATCCGGTTCCAGTTTTGCCCGCCATTCGTAATAATAACAACCAAAATAGAGGCGGTTTTGGGCGTGGTAGATGGCAAAATGATAGAGGAGCGGGAATTCTTCCTCGACCTGGACCTTATCCTCAGAGGCATAACTATGGTTATGGCTCAAAGTTTAATAACCGACATGATGAACGTTTTGTTTCTGAACTAAAGCTTTCAAAGAGTGAAGAAACATTGTCAAGAAAATGCATTGCATTTCAAGAGCCATGCGAACTTGCTTGCTATAGTCGTGTAGAAGGTGGAGATGTCTGCTTTGATGACCGCAGCTTGCGACTTTTTAAGCGTCTTATTACTGAAGATGTTGGAGCTGATCTCAATGAAGGTTATGATACTTTTATCGAGAAAAAAGATTTGGGTTCTGAGGGTTTTGGTGACCTTCTGGCTGCTATCAGAAACAGAAACATCCCACTTGGAAATATTCATTTTGTGACTTTCCGTAACAACCTGAATAAGATCCAGTCATTCTTAGCAGGTGTCCCCTATATTGTCATTGGATTTAGGGATGATGGGGGTCGACTTGTCCGCACAGAGAGACTAAGAACCAAAGACATAACACAAAGAGTAAAAATGAAGAACTACTGGCAGGGAGGAGTTTGCCTTGCATTTGCTGACGAGGTGTTATGCTGGCTCTATGGAACAGTCAAAGAGAATGAAGACTACATATTGCAGTTTGCTCCGCCTTTCACCCGATTAGAGCTTCTACAGGCCCAATCATGCCCAGATGCAATTAGCGGCCATGTCCAGCAATTGTAG 1113 0.4618 MDFSEQDVDNFGGDGARQSSSSSSSSSSSSRSSSNGSDGGETSSAGSGSGSASASASSSEGEDNGEEVDKRTHGYEERDLFGSDSDEKDLFGSDNEDYCKTLAISPYPVPVLPAIRNNNNQNRGGFGRGRWQNDRGAGILPRPGPYPQRHNYGYGSKFNNRHDERFVSELKLSKSEETLSRKCIAFQEPCELACYSRVEGGDVCFDDRSLRLFKRLITEDVGADLNEGYDTFIEKKDLGSEGFGDLLAAIRNRNIPLGNIHFVTFRNNLNKIQSFLAGVPYIVIGFRDDGGRLVRTERLRTKDITQRVKMKNYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFTRLELLQAQSCPDAISGHVQQL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0647 370 MobiDBLite consensus disorder prediction 63 89 - -
Vvi2g0647 370 PANTHER DOM-3 RELATED 272 358 IPR039039 -
Vvi2g0647 370 MobiDBLite consensus disorder prediction 13 61 - -
Vvi2g0647 370 MobiDBLite consensus disorder prediction 1 89 - -
Vvi2g0647 370 Pfam RAI1 like PD-(D/E)XK nuclease 272 293 IPR013961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0647 Vvi-Chr2 5674912 5683893 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0647 K14845 - vvi:100855043 478.018