Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0645 ATGGGAGGAGAGATGATGAAGAAAGGTGTGAGCAGGGAGAGGGAGGAAGCTATGGAGAAGATGACGGAGAGACTATCGTGTAAAGACAACCTTTATTTTCCAAGAGCATTGGAAGCCACAGCCACGACTCCTTCACAACGGAAATCCATCCTCCTCGACCTCCTCTCTCGCGACCCCGCCGTCTTCTTAGAGCGATATGGATCGCAATTGACCTCTGATGAGCTCAGGGAGTTCGATTCTTTGAAAGATGACTATGAGGTCAGTTGGCACTTAAAGCACATCCGGAGTGTAATGAGTCCAACTTCAGAGGAGTTAAAATCAAGGTCAGTGGCAGTGAAGAACCGAAGACGGGCATATCTAAATAAGTTGATTTATGATGGGCAGTACTTTTCGGAGGATGCTATGAGGGAGAGAGAACCATATTTGCATCACGAGTATGTGGGGAGGTTTCAGGATCCTAGTGGGAGAAGTATGGCAAGGCCGGGGGAGCGATGGTCAGAAACATTGCTCAGGCGGTCAGAGGAAGCGATGTTGGTTGCAAAAATCAGAGGGGAGCAGCAGAGGTTGGGCGTTGCTGAGAGGGACTGGGTTGGTAATGAGAGGTCCCAGCAAGATGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAAGAAGAAGAAGAGGAAGAAAAAGAAGAAGACGAAAAGCAGGCTGGAAAGGCTAGTAGGGTTTCAGATTCGTCCAGGGTGGTCATGGATCATGATGGCCCAGTCAATGGCAGCCAATCCTCCGATATGGAGTCTAACCAAAAAGCAACTCTATCTGCAGTGGAAATGCAAGATCAGATGGACCAATTCACCCACATTATGCATCAGAAATTTCTGTCAGGTGAAGATCGTGATTATCTAGACTACTCAAAAATAGATGATGATGAAACTTTGGATGACCACTGGCTAAGAGAGGCGAACTATGATGCTGAGGATAAGTACTTTGCTGAAGATGAATGA 1032 0.4777 MGGEMMKKGVSREREEAMEKMTERLSCKDNLYFPRALEATATTPSQRKSILLDLLSRDPAVFLERYGSQLTSDELREFDSLKDDYEVSWHLKHIRSVMSPTSEELKSRSVAVKNRRRAYLNKLIYDGQYFSEDAMREREPYLHHEYVGRFQDPSGRSMARPGERWSETLLRRSEEAMLVAKIRGEQQRLGVAERDWVGNERSQQDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEDEKQAGKASRVSDSSRVVMDHDGPVNGSQSSDMESNQKATLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDYSKIDDDETLDDHWLREANYDAEDKYFAEDE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0645 343 MobiDBLite consensus disorder prediction 242 258 - -
Vvi2g0645 343 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g0645 343 Coils Coil 197 252 - -
Vvi2g0645 343 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 97 7 343 IPR018613 -
Vvi2g0645 343 MobiDBLite consensus disorder prediction 193 281 - -
Vvi2g0645 343 MobiDBLite consensus disorder prediction 265 281 - -
Vvi2g0645 343 MobiDBLite consensus disorder prediction 202 241 - -
Vvi2g0645 343 Pfam Coiled-coil domain containing protein 97-like, C-terminal 114 342 IPR040233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0645 Vvi-Chr2 5660755 5666801 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0645 - - vvi:100257446 600.897