Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0644 ATGTGCAATGTTGTTTTTCCATCAATTCTGATCCTTTTGCCCGCCATTCGTAATAATAACAACCAAAATAGAGGCGGTTTTGGGCGTGGTAGATGGCAAAATGATAGAGGAGCGGGAATTCTTCCTCGACCTGGACCTTATCCTCAGAGGCATAACTATGGTTATGGCTCAAAGTTTAATAACCGACATGATGAACGTTTTGTTTCTGAACTAAAGCTTTCAAAGAGTGAAGAAACATTGTCAAGAAAATGCATTGCATTTCAAGAGCCATGCGAACTTGCTTGCTATAGTCGTGTAGAAGGTGGAGATGTCTGCTTTGATGACCGCAGCTTGCGACTTTTTAAGCGTCTTATTACTGAAGATGTTGGAGCTGATCTCAATGAAGGTTATGATACTTTTATCGAGAAAAAAGATTTGGGTTCTGAGGGTTTTGGTGACCTTCTGGCTGCTATCAGAAACAGAAACATCCCACTTGGAAATATTCATTTTGTGACTTTCCGTAACAACCTGAATAAGATACTGGCTACTGCTTATATCAGGCATGAGCCATGGGAAATGGGGGTGCATAAAAGGAATGGAGTTGTGTATCTTGATGTGCATAAACTACCAGAAAGACCACAAAGTGACTTGGATCGTCGGAGATGTTATTGGGGATACTGTTTTGAGAGCCTTGCCACTGAAGATCCAAGAAGAGCTGATGGAGAAGGGATACACCATATTGATGCCAATGCCGAATATTGTTCTGTGATTAAGACCAAATTAGGGGCTCATCGGATTTTGATGGGTGCTGAAATGGATTGCTGTGATTCAACTGATGATGGAAGAAGGTTCTATGTAGAGTTAAAGACAAGTCGTGAGCTGGACTATCATACTGAGGAAAGATATGAGAGGGAGAAACTGCTAAAATTTTGGATCCAGTCATTCTTAGCAGGTGTCCCCTATATTGTCATTGGATTTAGGTAA 963 0.4112 MCNVVFPSILILLPAIRNNNNQNRGGFGRGRWQNDRGAGILPRPGPYPQRHNYGYGSKFNNRHDERFVSELKLSKSEETLSRKCIAFQEPCELACYSRVEGGDVCFDDRSLRLFKRLITEDVGADLNEGYDTFIEKKDLGSEGFGDLLAAIRNRNIPLGNIHFVTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYWGYCFESLATEDPRRADGEGIHHIDANAEYCSVIKTKLGAHRILMGAEMDCCDSTDDGRRFYVELKTSRELDYHTEERYEREKLLKFWIQSFLAGVPYIVIGFR* 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0644 320 Pfam RAI1 like PD-(D/E)XK nuclease 265 320 IPR013961 -
Vvi2g0644 320 PANTHER DOM-3 RELATED 74 320 IPR039039 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi2g0644 Vvi-Chr2 5652307 5658734 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0644 K14845 - vvi:100248998 635.18