Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0640 ATGGCACTATCATTGAGAAAAGTGATCAGTGTCACGAAGAGTTGTTTATTTGTAAGATGCTTGACTTCAATTGGTCGGAAGACTGTCTTAAGGTCAATTGATCACAAAAGCTTACTGGATAGAAACTATTTTCAAAGGGTTATAGGATCAGATGTGCACCATAAAATGTGTCAGAACGTCTCCCTCCAGCATTTCTCTATCAGTAGTCAACCAGAGTTGATATGTTGGGAAGGTTCCTGTCATGCAGTTTTATTGAGAAAGCTTGAAATTGCTTTGAAGGATCATCAAGTAGATGAAGCATGGGAAACTTTCAAGGATATTAAAAGGTTGTATGGATTTCCTAGCCATTCTCTGGTGAGTAGGTTGATCACTGAATTGTCTTACTCTTCCAATCCACACTGGCTTCAAAAAGCATGTGATTTAGTTTATTTAATTCTTAAAGAGAAATCAGATTTACTTCATTCTGATTCTCTGACTAAGCTCTCCTTGTCCTTATCAAGAGCTCAAATGCCTATCCCTGCCTCTATGATCCTCAGATTGATGCTTGAGAAAGGGAGCGTGCCCCAAAAGAATGTGCTGTGGTTGATCATTCTGCATATGGTAAAGACAGAGATAGGGACGTATCTTGCATCCAATTACTTGGTTCAGATTTGTGACCATTTCCTGCTTTTAAGTGCAAGCAAATCCAATCATGCAAAACTTATAAAGCCTGACACAATGATTTTTAACCTTGTTCTTGATGCTTGTGTGAGATTCGGATCATCCTTCAAAGGCCAGCAGATCATAGAGTTGATGCCACAAGTAGGGGTTGGCGCTGATGCACACTCTATCATTATTATTGCCCAGATCCATGAGATGAATGGTCAGAGGGATGACTTGAAGAAATTTAAATGCCATATTGATCAAGTTTCAATTCAGTTGGCTTGTCATTATCGGCAATTCTATGATAGTTTGCTGAGCTTGCATTTCAAGTTTAACGATATTGATGGTGCTGCTGGGCTTGTGTTAGATATGTGTAGATGTTGGGATTCTCTTTCTATTCAGAAAGATAGGAATGATCCTCATAAGACTTGCCTTGTTCCAATTGGATCTTATTATCTCAAAGAAGGCTTGAAATTACAGATTGTGCCTGAGCTGCTTCAGAAGGATTCTGTCTTCAAAATGGATAGTAAACAGGAACTTCTGTTGTTTAGAAATGGGAAATATGTTCTTAGTAATAAGGCCCTTGCCAAGCTTATCATTGCATACAAGAGAGATGGTAGGATTGTTTTGGTCCCTTGGGCTTGCTAA 1290 0.3891 MALSLRKVISVTKSCLFVRCLTSIGRKTVLRSIDHKSLLDRNYFQRVIGSDVHHKMCQNVSLQHFSISSQPELICWEGSCHAVLLRKLEIALKDHQVDEAWETFKDIKRLYGFPSHSLVSRLITELSYSSNPHWLQKACDLVYLILKEKSDLLHSDSLTKLSLSLSRAQMPIPASMILRLMLEKGSVPQKNVLWLIILHMVKTEIGTYLASNYLVQICDHFLLLSASKSNHAKLIKPDTMIFNLVLDACVRFGSSFKGQQIIELMPQVGVGADAHSIIIIAQIHEMNGQRDDLKKFKCHIDQVSIQLACHYRQFYDSLLSLHFKFNDIDGAAGLVLDMCRCWDSLSIQKDRNDPHKTCLVPIGSYYLKEGLKLQIVPELLQKDSVFKMDSKQELLLFRNGKYVLSNKALAKLIIAYKRDGRIVLVPWAC* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0640 429 PANTHER BNAC05G43320D PROTEIN 35 422 - -
Vvi2g0640 429 Gene3D Tetratricopeptide repeat domain 81 353 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0640 Vvi-Chr2 5607265 5609423 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0640 - - vvi:100853585 826.624