Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0635 ATGGCGAGGGTGGTGGAAGGTGAAGAGTTGAGTCCCAGCCAGTGTAAGCAGGAAAGACAGCTAGGCATCAATTCATGCAAGGCAGTGGTGTTTGGGCAGCCTGCATCGCCTGCGTGTTGCCAGCGCATAAGGGTGAGCCACTGGGAGTCCGTATGTCCGGCCGTCAACCCCAAGTTGGCCGCACTCATAGACATCAACAAGGCCATCAAGATCCTCCAAACCTGTGGAAGGAAGGTCCCTCATCACTTCAAGTGTGGCAGCCTATATTTCCCATGA 276 0.5471 MARVVEGEELSPSQCKQERQLGINSCKAVVFGQPASPACCQRIRVSHWESVCPAVNPKLAALIDINKAIKILQTCGRKVPHHFKCGSLYFP* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0635 91 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 11 88 - -
Vvi2g0635 91 Gene3D - 14 82 IPR036312 -
Vvi2g0635 91 Pfam Probable lipid transfer 11 85 IPR016140 -
Vvi2g0635 91 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 23 81 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0635 Vvi-Chr2 5555980 5556374 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0635 33 91 Acyl Lipid Metabolism Gene Families AT4G33550 35.593 8.79e-09 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0635 - - vvi:100248732 193.741