Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0633 ATGGAAGGAATAAGGAGGAAATGCAGTAGTTCTTCATGGGCCTTCTGGGTGCTGATCTTGCTGGGAATGATGTTAATGGCGAGGGTGGTGGAAGGTGCAGAGTTGAGTCCCAGCCAGTGTAAGCAGGAAAGACAGCTAGGCATCAATTCATGCAAGGCAGTGGTGTTTGGGCAGCCTGCATCGCCTGCGTGTTGCCAGCGCATAAGGGTGAGCCACTGGGAGTGCGTATGTCCGGCCTTCAACCCCAAGTTGGCCGCACTCATAGACATCAACAAGGCCATCAAGATCCTCCAAACCTGTGGAAGGAAGGTCCCTCATCACTTCAAGTGTGGCAGCCTATATTTCCCATGA 351 0.5271 MEGIRRKCSSSSWAFWVLILLGMMLMARVVEGAELSPSQCKQERQLGINSCKAVVFGQPASPACCQRIRVSHWECVCPAFNPKLAALIDINKAIKILQTCGRKVPHHFKCGSLYFP* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0633 116 Gene3D - 40 107 IPR036312 -
Vvi2g0633 116 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 17 113 - -
Vvi2g0633 116 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 48 106 IPR036312 -
Vvi2g0633 116 Pfam Probable lipid transfer 27 110 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0633 Vvi-Chr2 5533954 5534423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0633 12 116 Acyl Lipid Metabolism Gene Families AT4G33550 27.027 7.27e-10 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0633 - - vvi:100853220 246.899