Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0632 ATGAAAGGAAAGACATGGGGTGTGATGGTGGTGATGGTGGTGGCAGTGGTGGGTATGTGGGAGGTGAAGATGTGTGGAGCAGTGAGTGGGGCAGATTGTAAGGAGGAGAGGAGAGTAGCGATTAATGCATGCAAACCAATTTTGTATGGCAAAGATCCCACTCCTGCTTGTTGTGAGCGGATAAGGGTCACTCATATTGAGTGTGTGTGCCCTGTGATTACTCCTAAGTTGGCTGCCCTTGTGGATGTCAACCGAATGGTGAGGCTCATTGAAGGTTGTGGAAGGAATGTTCCTCGTCACTACAAGTGTGGCAGTATAACTACTCCGTAA 330 0.4879 MKGKTWGVMVVMVVAVVGMWEVKMCGAVSGADCKEERRVAINACKPILYGKDPTPACCERIRVTHIECVCPVITPKLAALVDVNRMVRLIEGCGRNVPRHYKCGSITTP* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0632 109 Pfam Probable lipid transfer 21 103 IPR016140 -
Vvi2g0632 109 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 10 108 - -
Vvi2g0632 109 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 99 IPR036312 -
Vvi2g0632 109 Gene3D - 37 100 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0632 Vvi-Chr2 5523371 5523828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0632 17 109 Acyl Lipid Metabolism Gene Families AT4G33550 29.032 1.15e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0632 - - vvi:109124264 210.69