Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0631 ATGAAAGTGGGTTGTGGAGGGTTTGTCGAAGGAGAAATAATAATGCAGACGGAAAGGACGGGGAGACGGAGCTGGGGACGGTGTATGGTGTTGTTGGGGATGATGGTGGTGGTGGCGGCGGCAGATGGTTTAGAGTTGTTGCCCAGCCAGTGTAAGAAGGAGAGAGACGTGGTGATAAATTCATGCCAAGGGTTTGTGTTTGGGCAGGCCGCATCGCCGGTGTGTTGTGAGCAGGTGAAGGTGTTCCATTTTGAGTGCTTATGCCCAGCTTTCACCCCCAAGTTGGTGGCACTCTTCGACGTTAACAAAGCCATCAAGCTCCTACAAGACTGTGGGAGGAGGGTCCCTCGTCACTTCAAGTGTGGCAGTAAGCTCTCTCTCTCTCTCTCTTTCTTCACCAGACAAGCGTGCATTCTCCCTCCATAA 426 0.5235 MKVGCGGFVEGEIIMQTERTGRRSWGRCMVLLGMMVVVAAADGLELLPSQCKKERDVVINSCQGFVFGQAASPVCCEQVKVFHFECLCPAFTPKLVALFDVNKAIKLLQDCGRRVPRHFKCGSKLSLSLSFFTRQACILPP* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0631 141 Pfam Probable lipid transfer 46 121 IPR016140 -
Vvi2g0631 141 Gene3D - 47 118 IPR036312 -
Vvi2g0631 141 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 29 124 - -
Vvi2g0631 141 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 59 122 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0631 Vvi-Chr2 5520450 5520875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0631 27 123 Acyl Lipid Metabolism Gene Families AT4G33550 24.272 6.08e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0631 - - vvi:109124351 226.483