Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0629 ATGCATATGGGTAGGTGCTCAATTTGTGGGAGAGGAGAGATGGCAGGTGTGATGAAGGGAAAAGCATGGGGCCTGGGGATATTGATGATGGTGGTAGTGTTGGGTGTGTGGGAGGTGAGGATGGCAAGTGCAGCAGTGAGTGCTGCCAAGTGTAAGGAGGAGAGGAGGCTTGGGATTAATGCATGCAAAGCAGTTGTCTACGGCAAGAGTCCGACGCCAGCGTGTTGCCATAGGATGAGGGTCACACACCTGGGGTGCGTGTGCTCTGTGATTACACCTAAGTTGGCTGCCCTTGTGGATGTCAACCGAATGATAGAGCTTGTTAAAGGTTGTGGAAGGAAGCTCCCTCGGCACTACAAGTGTGGGAGTATCACCTTTCCATAA 384 0.5208 MHMGRCSICGRGEMAGVMKGKAWGLGILMMVVVLGVWEVRMASAAVSAAKCKEERRLGINACKAVVYGKSPTPACCHRMRVTHLGCVCSVITPKLAALVDVNRMIELVKGCGRKLPRHYKCGSITFP* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0629 127 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 61 117 IPR036312 -
Vvi2g0629 127 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 28 126 - -
Vvi2g0629 127 Gene3D - 56 118 IPR036312 -
Vvi2g0629 127 Pfam Probable lipid transfer 32 121 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0629 Vvi-Chr2 5504973 5508755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0629 24 127 Acyl Lipid Metabolism Gene Families AT4G33550 26.786 3.05e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0629 - - vvi:100853176 230.72