Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0628 ATGAACGGGGGGAAGTCATGGGGTGTGATGGTGGTCTTGGTGGTGCTGCTGCTGGGTATGTGGGAGGTGAAGACGGGCAGTGCAGCACCGAGTGCAGCAGAGTGTAAGGAGGAGAGGAGGCTTGCGATAAATGCATGCAAGCCAGTGGTGTATGGGAAGGATCCCTCACCCGCTTGTTGCGAGAGGGCAAGGGTCACCCATATTGAGTGTGTGTGCCCTGTGATTACTCCTAAGTTGGCTGCCCTTATAGACGTCAACAGGGCTGTACGCCTCATCGAAGGTTGTGGAAGGAAGGTCCCTCGTCACTACAAGTGCGGGAGCATCACCACTCCTTGA 336 0.5595 MNGGKSWGVMVVLVVLLLGMWEVKTGSAAPSAAECKEERRLAINACKPVVYGKDPSPACCERARVTHIECVCPVITPKLAALIDVNRAVRLIEGCGRKVPRHYKCGSITTP* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0628 111 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 11 110 - -
Vvi2g0628 111 Gene3D - 32 102 IPR036312 -
Vvi2g0628 111 Pfam Probable lipid transfer 17 105 IPR016140 -
Vvi2g0628 111 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 101 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0628 Vvi-Chr2 5494743 5495249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0628 8 111 Acyl Lipid Metabolism Gene Families AT4G33550 27.273 2.32e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0628 - - vvi:100853134 225.713