Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0626 ATGGCTCGGAAGCAAATCGACTCCGAACCCAGCCGATATGCTTCTCTGATCCTTCTTTTGATGGGTGTCGCCTCATGCACTCTGGTTTATGCGTTCCTTTCTGTGGTGCTCAGACCCTGGGCCGAGTCTCCAGTTTCAGAGCTTGATGCTTCAGCATTGGATGGGAGTAGTAGGGCGGAGGTTGGGAGCGAAGGGTGTTGTAGAGGGATTGAGAATTTGGAACTTTGGGGGCCTGCGGTGAAGTGGGGTTCTGACTTTAAGTTCAATTCTTCTAAGGAGTGTTGCATGGCTTGTAAAGGGATGTGTAGTGGGAATGATGGGCCGTGCTTGTGTGATACTTGGGTGTTTTGTGGGAATAGAGAGGCTTGCGGGCCAAAATTCGGTGAGTGTTGGTTGAAGAAACAGAAGGATATATTAGCTCCTGATCGGCAAGAATCAGGGCACAAAGTTAGTTGGACTTCTGGGATTATCTTTGGAAAAGGAGAGGGCATTGTTGGATTGGAAACAGAGTATGGTACTCTTCATATAAAACTCTTACCTGACTGTGCTCCACACTCTGTGGCTTATATTCTTGAGCTGTTGGCATTGCGCCATTGTGCGGGCTGCCAATTTTATCGAGCAGAAAGCAGGGGAATGTATTGGGATTCACAAGGAAACCACATAAAAGATGCTCCTCTTGGCCCTCCATTTGCTTTGATTCAAGGAACACTGGAAGCCCTAGGAACCACATTCAAGAAGATCCCCACAGAAGATTGTCCAACAATACGAAGGGGTTCAGTTGCATGGGTTGGTTCGGGCCCTGAATTCTTCATAAGCCTGGCGAACCACCAAGAGTGGAAGAAAGTATACACTGTGTTTGGTTCTGTTCTCCCCGAAGACATGGAAATTGCAGAGAAAATTGCTCAGCTCCCCACCAAATTGGATGTTTGGAACAAAATCAACGTGTCTGTTCTTGAAAACCCAATACCCTTACGGCTCCGGAGAATGAAGAAGAGTGAGGGTGATCTTAACGTTGCTACAAATGTGGAATCAGAGTGA 1038 0.4721 MARKQIDSEPSRYASLILLLMGVASCTLVYAFLSVVLRPWAESPVSELDASALDGSSRAEVGSEGCCRGIENLELWGPAVKWGSDFKFNSSKECCMACKGMCSGNDGPCLCDTWVFCGNREACGPKFGECWLKKQKDILAPDRQESGHKVSWTSGIIFGKGEGIVGLETEYGTLHIKLLPDCAPHSVAYILELLALRHCAGCQFYRAESRGMYWDSQGNHIKDAPLGPPFALIQGTLEALGTTFKKIPTEDCPTIRRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDMEIAEKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNVATNVESE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0626 345 FunFam Predicted protein 160 323 - -
Vvi2g0626 345 Gene3D - 157 320 IPR029000 -
Vvi2g0626 345 SUPERFAMILY Cyclophilin-like 160 315 IPR029000 -
Vvi2g0626 345 PANTHER EXPRESSED PROTEIN 1 332 - -
Vvi2g0626 345 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 165 307 IPR002130 GO:0000413|GO:0003755
Vvi2g0626 345 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0626 Vvi-Chr2 5471911 5475469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0626 - - vvi:100853434 721.85