Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0625 ATGAAGGGGGGGAAGTCATGTGGTGTGATGGTAGTGTTGGTGGTGGTGTTGGTGGTGGGTATGTGGGAGGTGAAGACGAGCAGTGCAGCACCGAGTGCAGCAGAGTGTAAGGAGGAGACGAGACTTGCGATTAAGGCATGCAAGCCAGTGGTGTATGGGATGGATCCCTCACCCGCTTGTTGCGAGAGGGCAAGGGTCACCCATGTTGAGTGTGTGTGCCCTCTGATTACTCCTAAGTTGGCTGCCCTTATAGACGTCAACAAGGCTGTACGCGTCATCGAAGGTTGTGGAAGGAAGGTCCCTCGTCACTACAAGTGCGGGAGTATCACCACTCCTTGA 339 0.5457 MKGGKSCGVMVVLVVVLVVGMWEVKTSSAAPSAAECKEETRLAIKACKPVVYGMDPSPACCERARVTHVECVCPLITPKLAALIDVNKAVRVIEGCGRKVPRHYKCGSITTP* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0625 112 Pfam Probable lipid transfer 18 106 IPR016140 -
Vvi2g0625 112 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 44 102 IPR036312 -
Vvi2g0625 112 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 10 111 - -
Vvi2g0625 112 Gene3D - 35 103 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0625 Vvi-Chr2 5436503 5449880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0625 10 112 Acyl Lipid Metabolism Gene Families AT4G33550 28.440 3.26e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0625 - - vvi:100256037 221.09