Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0610 ATGGCTGGAGCATCTTCGCCCTGCATCTTCTGTCAAATTGCCCGCTCTTACACCTCCACCACTCTTCTCCACTCCGATGACAAGGTGGTTGCATTTCAAGACATCAACCCTTCCGCCTTCAGGCATTACTTGGTAATTCCTGTGGAGCACATCGCAACTGTTAAAGACCTCCAGAGGAGAGCTGAAGATTATTCGTTAGTTGGTCACATGTTAAATGTGGGGCAAACCCTACTACACAGAGATGCACCTCATTCCATGGAGTACAGATTGATCCAGAGAAGCTACTCTAGACTTCAGTTACCACCATTAGCTGTTGGAGTGTCCAAGAGCCATGTATTATTGAAAACTTTGGCTTTCATCGGCCTCCATTTAACAGTGTTAACCATCTGCACCTCCATTGTTTGGCACTTCCTTTCACACCTAGATGGAAACGTGTAA 438 0.4612 MAGASSPCIFCQIARSYTSTTLLHSDDKVVAFQDINPSAFRHYLVIPVEHIATVKDLQRRAEDYSLVGHMLNVGQTLLHRDAPHSMEYRLIQRSYSRLQLPPLAVGVSKSHVLLKTLAFIGLHLTVLTICTSIVWHFLSHLDGNV* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0610 145 PANTHER APRATAXIN-RELATED 5 90 - -
Vvi2g0610 145 Gene3D - 2 114 IPR036265 -
Vvi2g0610 145 Pfam Scavenger mRNA decapping enzyme C-term binding 8 84 - -
Vvi2g0610 145 ProSiteProfiles HIT domain profile. 9 57 IPR011146 GO:0003824
Vvi2g0610 145 SUPERFAMILY HIT-like 5 84 IPR036265 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0610 K22966 - vvi:100265964 181.8