Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0607 ATGCAAGCACAGAAGGAGGCTCCTTCTGATCTGCACTGCAAGGACAAGTTTCTCCTTCAGAGTGCAGTTGTCACTGCTGGCACGAGCCAAACGGATATTACTGCAGATATGTTTAATAAGGATTCGGGTCATATTGTTGAGGAATGCAAGTTGAAAGTGGTTTATGTTTCTCCCCCTCAACCACCATCACCAGTTCCTGAAGGATCAGAAGAGGGTTCTTCGCCAAAGGGCCCTTCAACAGACAATGGCAACCCAAGTGGTCCTGAATTTGCCTCTGTTACAAAAGCATTGGCCAAGTCTCAAGAAAATTCTTCAGAGACTAGAGCTCTTATTTCAAAGCTGACTGAGGAAAGGAATAATGCAATCCGACGAAATAGCAAACTTCGTCAGGAACTGGACCTCTTAAAGCATGATGGAAAGAAAAACCGTGGTGGTGTCTCATTCATGTTTGTCGCCATTGTTGGTTTGATTGGCATAATTGTCGGGTACTTCATCAAGAAGACATAA 507 0.4418 MQAQKEAPSDLHCKDKFLLQSAVVTAGTSQTDITADMFNKDSGHIVEECKLKVVYVSPPQPPSPVPEGSEEGSSPKGPSTDNGNPSGPEFASVTKALAKSQENSSETRALISKLTEERNNAIRRNSKLRQELDLLKHDGKKNRGGVSFMFVAIVGLIGIIVGYFIKKT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0607 168 SUPERFAMILY PapD-like 1 71 IPR008962 -
Vvi2g0607 168 MobiDBLite consensus disorder prediction 73 89 - -
Vvi2g0607 168 Gene3D Immunoglobulins 1 60 IPR013783 -
Vvi2g0607 168 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 164 IPR016763 GO:0005789
Vvi2g0607 168 MobiDBLite consensus disorder prediction 57 108 - -
Vvi2g0607 168 Coils Coil 97 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0607 Vvi-Chr2 5258859 5260433 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0607 - - vvi:100253999 283.493