Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0606 ATGGCTTCATCTCTCGCTCCACGCCGTGCCGCCTCCTCTCCTCTCCTCGCAAAACTTGTCGGCACAATCCGGGTTGCCTCTGCTTCTCGCTCCTTCAATACCAACGCTCAGGTGGCCGACTACGATGATGGCGAAGACCGCCGCACCGTCTCTCGCCCCCGGTATTCTCCTTCTAATCTCTTTGCAGATGCGTTTGATCCGTTTTCTCGGACGAGAAGTTTGATCCAGACGCTGAACTTGATGGATCGGTTCATGAAGAGCCCATTAGTGGCAGCAGCACAAGGCATGGGAGCTGTGTCGAGAAGAGGATGGGACGTGAAGGAGGAGAAAGACGCTCTGTTCGTGAGAATGGACATGCCGGGACTGGGGAAAGAGGACGTGAAGGTGTCAGTGGAGCAGAACACACTCACGATCAAAGGCGAAGAAGGCGAAAAATGGGAGAACGATGAGTGTAGAAGGAAATACACCAGCAGAATCGATCTGCCAGCTAAGATGTACAAGTTTGATGAGATCAAGGCAGATATGAAGAATGGTGTACTGAAGGTGGTGGTTCCTAAAGTCAAGGAAGATGGGAGGAAAGAAGTGTTACAAGTTGATATCGATTGA 606 0.5132 MASSLAPRRAASSPLLAKLVGTIRVASASRSFNTNAQVADYDDGEDRRTVSRPRYSPSNLFADAFDPFSRTRSLIQTLNLMDRFMKSPLVAAAQGMGAVSRRGWDVKEEKDALFVRMDMPGLGKEDVKVSVEQNTLTIKGEEGEKWENDECRRKYTSRIDLPAKMYKFDEIKADMKNGVLKVVVPKVKEDGRKEVLQVDID* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0606 201 SUPERFAMILY HSP20-like chaperones 70 193 IPR008978 -
Vvi2g0606 201 Gene3D - 59 200 IPR008978 -
Vvi2g0606 201 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 27 193 IPR044656 -
Vvi2g0606 201 Pfam Hsp20/alpha crystallin family 105 200 IPR002068 -
Vvi2g0606 201 CDD ACD_sHsps-like 105 178 - -
Vvi2g0606 201 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 95 201 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0606 Vvi-Chr2 5255243 5256102 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0606 K13993 - vvi:100248906 388.267