Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi2g0605 | ATGGCTTCATCTCTAGCCCTACGCCGTGCCACTTCCTCTCCTCTCTTCACAAAACTTGTCAGCCCAATACGGGTTGCCTCTGCTTCTCGCTCCTTCAATACCAACGCTCAGGTGGCCGACTACAATGATGGCGAAGACCGCCGCACCGTCTCTCGCCCCCGGTATTCTCCTTCCAATCTCTTCTCAGATGTGTTTGATCCGTTTTCTCGGACGAGAAGTTTGAGCCAGGTGCTGAACTTGATGGATCAGTTCATGGAGAACCCATTAGTGGCAGCATCACGAGGGATGGGAGCTGTGTCGAGAAGAGGATGGGACGTAAAGGAGGAGAAAGACGCTCTGTTCGTAAGAATGGACATGCCGGGACTGGGGAAAGAGGACGTGAAGGTGTCAGTGGAGCAGAACACACTCATCATCAAAGGCGAAGGAGGCAAAGAATTGGAGAACGATGAGACTGGAAGGAAATACACCAGCAGAATCGATCTGCCGGCCAATCTGTACAAGTTTGATGAGATCAAGGCAGAGATGAAGAATGGTGTACTGAAGGTGGTGGTTCCTAAAGTTAAGGAAGATGGGAAGAAAGATGCGTTTCAAGTCAATATCAATTGA | 606 | 0.5 | MASSLALRRATSSPLFTKLVSPIRVASASRSFNTNAQVADYNDGEDRRTVSRPRYSPSNLFSDVFDPFSRTRSLSQVLNLMDQFMENPLVAASRGMGAVSRRGWDVKEEKDALFVRMDMPGLGKEDVKVSVEQNTLIIKGEGGKELENDETGRKYTSRIDLPANLYKFDEIKAEMKNGVLKVVVPKVKEDGKKDAFQVNIN* | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi2g0605 | 201 | PANTHER | 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 26 | 194 | IPR044656 | - | |
| Vvi2g0605 | 201 | Gene3D | - | 60 | 200 | IPR008978 | - | |
| Vvi2g0605 | 201 | CDD | ACD_sHsps-like | 105 | 178 | - | - | |
| Vvi2g0605 | 201 | Pfam | Hsp20/alpha crystallin family | 105 | 200 | IPR002068 | - | |
| Vvi2g0605 | 201 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 95 | 201 | IPR002068 | - | |
| Vvi2g0605 | 201 | SUPERFAMILY | HSP20-like chaperones | 71 | 193 | IPR008978 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi2g0605 | Vvi-Chr2 | 5249169 | 5250009 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi2g0605 | K13993 | - | vvi:100243757 | 390.963 |