Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0588 ATGGGTTCTAAGGGTACAGCCATGTTCTTCATCTTCATGATTTTCATGTTAATGGCATTGCCGCCAATGCAGGCTTGTGGCTATTGCTCACAGCCACAGCCACCTTACCGCTACCCAAGCCCACCTTACCGCCGCCCAAACACACCGACAATTCCTCATCCTCATCCTCATCCTCCATCCAAGAAGCACCCACCCGGCCACCACAAAGAGCGACCGATAGTATCGCCGCCTTCAAATAATCCACCAGGAATAACACCTCCGGTAGTAAACCCTCCGGTGACCATTCCGCCACCCTCAAGCACGTACCCACCTTATACTGGTAACCCCCCTTCCGGGGGTGGCGGCGGTGGAGGTGGTGGTGGTGGAGGCGGCGGCGGAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGTGGTGGTCTTCCAGGTCTTAACCCTCCCCCCTCTACTTCACCAACTTGTCCAGTAAATGCGATTAAATTAGGGGCTTGCGTGGATGTGCTTGGAGGTTTGGTGCATATTGGTTTGGGGAATCCAGTGGAGAATGTATGCTGCCCGGTGCTTGGAGGCTTGCTAGAGCTTGAAGCAGCTGTGTGTCTCTGCACTGCCATAAGGCTTAAGCTTCTTAACCTCAACATATTCATTCCTATTGCTCTAGAAGCCCTTATAACTTGTGGGAAGACTCCTCCACCTGGTTTCGTATGTCCTCCTCTCTACATGATTCCCCTGGTGCTCTGA 732 0.5423 MGSKGTAMFFIFMIFMLMALPPMQACGYCSQPQPPYRYPSPPYRRPNTPTIPHPHPHPPSKKHPPGHHKERPIVSPPSNNPPGITPPVVNPPVTIPPPSSTYPPYTGNPPSGGGGGGGGGGGGGGGGGGGGGGGGGGGLPGLNPPPSTSPTCPVNAIKLGACVDVLGGLVHIGLGNPVENVCCPVLGGLLELEAAVCLCTAIRLKLLNLNIFIPIALEALITCGKTPPPGFVCPPLYMIPLVL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0588 243 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 155 235 IPR036312 -
Vvi2g0588 243 CDD HPS_like 155 233 IPR027923 -
Vvi2g0588 243 Pfam Hydrophobic seed protein 151 234 IPR027923 -
Vvi2g0588 243 MobiDBLite consensus disorder prediction 38 55 - -
Vvi2g0588 243 MobiDBLite consensus disorder prediction 75 105 - -
Vvi2g0588 243 MobiDBLite consensus disorder prediction 38 149 - -
Vvi2g0588 243 Gene3D - 148 235 IPR036312 -
Vvi2g0588 243 PANTHER - 6 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0588 Vvi-Chr2 5134356 5135355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0588 151 235 Acyl Lipid Metabolism Gene Families AT4G22490 36.471 3.61e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0588 - - vvi:100262648 278.1