Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0586 ATGGATTCCAAGGGCTCTTCATCAGCTGCTCTCTTCCTCTCCATCAACCTTCTCTTCTTTGCTCTTGTAAGCGCTAACAAACCTTGCTCTCCGCCTAAGCCAACTCCAACTCCGAGTACTCCATCCACCCCTTCCAATGGCAGCTGCCCCAGAGATGCCCTTAAACTAGGTGTCTGTGCCAAGCTGCTTAATGGGACAGTTGGGGCTGTCGTTGGAACCCCTCCTGTTACTCCCTGCTGCTCCTTGCTTGAAGGGCTTCTGGATCTTGAGGTTGCCGCTTGCCTTTGCACAGCCATTAAAGCTAACATTCTTGGCATCCACCTCGACATCCCAGTTTCACTCAGCTTGCTTGTCAACATTTGTGGGAAGAAGCTTCCCAAAGACTTCCAATGTGCTTAA 399 0.5088 MDSKGSSSAALFLSINLLFFALVSANKPCSPPKPTPTPSTPSTPSNGSCPRDALKLGVCAKLLNGTVGAVVGTPPVTPCCSLLEGLLDLEVAACLCTAIKANILGIHLDIPVSLSLLVNICGKKLPKDFQCA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0586 132 PANTHER - 6 131 - -
Vvi2g0586 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 131 IPR036312 -
Vvi2g0586 132 SMART aai_6 49 131 IPR016140 -
Vvi2g0586 132 Pfam Hydrophobic seed protein 49 132 IPR027923 -
Vvi2g0586 132 Gene3D - 44 132 IPR036312 -
Vvi2g0586 132 CDD HPS_like 46 131 IPR027923 -
Vvi2g0586 132 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0586 Vvi-Chr2 5125641 5126039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0586 43 131 Acyl Lipid Metabolism Gene Families AT4G22490 38.462 4.29e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0586 - - vvi:100252384 220.705