Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0583 ATGATGTCATTAGGTTGCCCAAGTTTGGCTATAAAAAGGCCACAAGCCTCCGCCATCGACGTGCCACAGCTCAGTCTCTCATCTCTCTCCTCCTCTGTAGCTCTGCTTAAGTGCTACCTGCCAATCTCGATAACAAAGCCTCTTCAACCAATTCAGACCATGTCACTCCCTCAAACTCAAGGGGATACCATCCTAGATGCTTGGGACTATAAAGGGCGTCCAGCCGAGAGGTCCAGGACTGGTGGCTGGATGAGTGCAGCCATGATTCTAGGGGTTGAGGCTTGTGAGAGATTAACCACGCTTGGTATTGCGGTTAATCTGGTGACGTACTTGACGGGTACTATGCATTTAGGCAATGCAAGCTCTGCCAATACAGTCACCAACTTCCTTGGCACCTCCTTCATGCTCTGCCTGCTCGGTGGTTTTGTGGCTGACACCTTTCTGGGCAGGTACCTCACCATCGCCATCTTTGCCACAGTTCAAGCGACTGGTGTTACAATCTTGACAATCTCAACTACAATCCCCAGCCTCCGGCCACCCAAATGTGCCATGGAAACCGGCCCATTGTGCACTCCAGCAAGTGGCATGCAGCTGGTTGTTCTTTATCTAGCATTGTATCTGACCGCCCTGGGAACCGGGGGTCTAAAATCGAGTGTTTCCGGCTTTGGGTCTGATCAATTTGATGATTCGAACAAGGAGGAGAGAAACCAGATGACAAACTTCTTCAACTGGTTCTTCTTCTTTATAAGCATAGGATCACTGGCTGCAGTCACCATTCTTGTATACATACAAGACAACCTGGGAAGGAAATGGGGTTATGGAATTTGCGCATGTGCAATTGCGATTGGCCTAGTGGTATTTTTATCAGGCACTAGAAAATACAGGTTCAAGAAACTCGTTGGTAGCCCATTAACACAGATCGCCACAGTGTTTGTAGCTGCTTGGAAGAAAAGAAATCTGGAATTGCCAACAGATTCGTCGTTTCTTTTCGATATCGATTATGCTGCAGCTGAAGGGCAAAAGAAGAAGAAGCAGAGGTTACCTCATAGCAAGCAGTTCCGTTTCCTTGACCGGGCTGCAATCAAGGATCCTCAGATGGGTAATGGCATTAATGCTGTGGTGAACAAATGGCAACTATCAACCCTAACTGATGTGGAAGAAGTGAAATTGGTGCTTCGGATGCTCCCCACCTGGGCAACTACTATCTTGTTCTGGACAGTCTATGCTCAAATGACCACATTTTCTGTGTCTCAGGCTACCACCATGGACCGGCACATAGGCAAATCATTCCAAATCCCACCTGCATCACTAACAGTTTTCTTTGTTGGAGCCATTCTATTGACTGTTCCAGTGTATGACAGGATATTGGTCCCAATAGCAGCCAGGATACTTAAGAACCCCCAAGGGCTGACCCCTTTGCAACGTATTGGTGTTGGCCTAGTCCTCTCAATATTAGCAATGGTAGCAGCAGCACTGACTGAACTCAAGCGGTTGCATGTTGCTCGATCCCATGGTTTGACAGATGATCCCACTGCAGTTGTCCCATTAGGTGTGTTTTGGCTAGTGCCCCAGTTCTTATTGGTGGGTGCGGGTGAGGCCTTCACTTATATTGGGCAGCTTGATTTCTTCCTTAGGGAGTGTCCTAAAGGGATGAAGACCATGAGTACAGGGCTGTTTTTGAGCACACTTTCATTAGGGTTTTTCTTGAGCTCCCTCCTGGTTTCCATAGTGCACAAGTTGACTGGGGACAGAAAGCCATGGCTAGCTGATAATCTTAACCAGGGAAAGCTCTACAATTTCTACTGGCTTCTGGCAATTTTGAGTGTCTTCAACTTGGGATTCTACTTAATTGGTGCTAAATGGTATGTGTACAAGGACAAGAGGCTTGCCGATGAGGGAATTGAATTGGAGGACGTTGGCCCTACTTGTCACTAA 1935 0.4744 MMSLGCPSLAIKRPQASAIDVPQLSLSSLSSSVALLKCYLPISITKPLQPIQTMSLPQTQGDTILDAWDYKGRPAERSRTGGWMSAAMILGVEACERLTTLGIAVNLVTYLTGTMHLGNASSANTVTNFLGTSFMLCLLGGFVADTFLGRYLTIAIFATVQATGVTILTISTTIPSLRPPKCAMETGPLCTPASGMQLVVLYLALYLTALGTGGLKSSVSGFGSDQFDDSNKEERNQMTNFFNWFFFFISIGSLAAVTILVYIQDNLGRKWGYGICACAIAIGLVVFLSGTRKYRFKKLVGSPLTQIATVFVAAWKKRNLELPTDSSFLFDIDYAAAEGQKKKKQRLPHSKQFRFLDRAAIKDPQMGNGINAVVNKWQLSTLTDVEEVKLVLRMLPTWATTILFWTVYAQMTTFSVSQATTMDRHIGKSFQIPPASLTVFFVGAILLTVPVYDRILVPIAARILKNPQGLTPLQRIGVGLVLSILAMVAAALTELKRLHVARSHGLTDDPTAVVPLGVFWLVPQFLLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFLSSLLVSIVHKLTGDRKPWLADNLNQGKLYNFYWLLAILSVFNLGFYLIGAKWYVYKDKRLADEGIELEDVGPTCH* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0583 644 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 140 164 IPR018456 GO:0006857|GO:0016020|GO:0022857
Vvi2g0583 644 SUPERFAMILY MFS general substrate transporter 73 626 IPR036259 -
Vvi2g0583 644 Pfam POT family 151 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi2g0583 644 Gene3D MFS general substrate transporter like domains 57 632 IPR036259 -
Vvi2g0583 644 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 81 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0583 Vvi-Chr2 5106361 5110187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0583 54 638 Organic Solute Cotransporters AT1G12110 67.121 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0583 - - vvi:100259122 1124.77