Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0582 ATGTTTTCAATCAAATCTAAAAAATTAGGGAGATTAATTTTGACATCTTCAATCAAATCAAGTGCAGCACAACTGAATCATCTGATGATATTGAGAAACAAGAGCTTGAGGAAGTGTCAGATGAGGAGGAAACCTCTTTCTTTGACACTAGAGAGGATTTTGCTGAACCCACAGTCAGTTGTGGTTGTAAATTACATGGATAAGCAAATGAAACCTGAAATTCAACTTGATAATGCAGAGAAGATTCATACTGAGAATAGATTTTGTGAATCTAGATATCCACAAATTGAAAGGCGAAAGAAGCTTCCCGATCCAGTTGAGAAAGAGAAAGGGGTAAGTCTTTGGTCTATGATCAAAGACAATGTCGGAAAGGATCTCACACGAGTTTGTCTCCCTGTTTATTTTAATGAGCCAATATCATCCCTTCAGAAATGTTTTGAGGACTTGGAGTACTCTTATCTTTTGGATCGAGCATATGAATATGGAAAAGCGGGAAACAGTCTCCTAAGAGTTCTACATGTTGCAGCTTTTGCGGTTTCTGGATATGCGTCCTCTGAAGGTCGGCATTGCAAACCCTTCAACCCATTGTTAGGGGAAACTTATGAAGCTGATTTTCCTGATAAAGGAATTCGTTTTTTCTCTGAGAAGGTTAGTCATCACCCAACACTCATTGCCTGCCATTGTGAAGGTAAAGGGTGGAAATTCTGGGCTGACAGTAACCTACGAACAAAATTTTGGGGACGATCAATTCAGCTCGACCCTGTGGGAGTTTTGACCCTTGAGTTTGATGATGGTGAGGTTTTCAAATGGAGCAAGGTCACGACCACCATTTATAATCTTATCCTTGGTAAAGTGTATTGTGATCACCATGGTACAATGCACATACAAGGTAATCACCAACATTCATGCAAACTCAAGTTCAAAGAGCAGGCTCTTCTTGACAGAAATCCTCACCAAGTACATGGTTTTGTTGAGGATCTCACAGGGGAAAGGGCTGCTACCCTATTTGGGAAGTGGGATGACAGCATGTATTACGTTCTTGGAGACAGAACTGGCAAGCTGAAGGACTGTAATGGGTCCCCGGATGCCTCCTTGTTGTGGAAAAGGAATAGGCCACCTCCTTGTCTCACTCGGTACAACTTAACGTCATTTGCAATTACACTAAATGAGCTGACGTCAGGACTGCAGGAGAAGCTCCCACCCACGGATTCAAGACTTAGACCAGATCAACGACATCTAGAGAATGGAGAATATGAAAAGGCAAATGCAGAAAAACTACGGTTAGAGAAGCGGCAGAGGATGTCAAGGAAATTACAAGAAAATGGATGGAAACCAAAGTGGTTCGAGAGAGAAGGTGAAGATGGACCCTTTCGTTATATGGGCGGATACTGGGAAGCTCGGGACCAGGGAAAATGGGATGGGTGCCCAAATATATTCGGTGAATTCACAGAAGACCTTGTTAATTCCTATGAAGGGTCTGGATTATAA 1488 0.4207 MFSIKSKKLGRLILTSSIKSSAAQLNHLMILRNKSLRKCQMRRKPLSLTLERILLNPQSVVVVNYMDKQMKPEIQLDNAEKIHTENRFCESRYPQIERRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRVLHVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGIRFFSEKVSHHPTLIACHCEGKGWKFWADSNLRTKFWGRSIQLDPVGVLTLEFDDGEVFKWSKVTTTIYNLILGKVYCDHHGTMHIQGNHQHSCKLKFKEQALLDRNPHQVHGFVEDLTGERAATLFGKWDDSMYYVLGDRTGKLKDCNGSPDASLLWKRNRPPPCLTRYNLTSFAITLNELTSGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKLRLEKRQRMSRKLQENGWKPKWFEREGEDGPFRYMGGYWEARDQGKWDGCPNIFGEFTEDLVNSYEGSGL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0582 495 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 26 467 IPR000648 GO:0008289
Vvi2g0582 495 Pfam Oxysterol-binding protein 113 467 IPR000648 GO:0008289
Vvi2g0582 495 FunFam Oxysterol-binding protein-related protein 2A 410 481 - -
Vvi2g0582 495 Gene3D - 410 470 - -
Vvi2g0582 495 FunFam oxysterol-binding protein-related protein 1D isoform X1 199 371 - -
Vvi2g0582 495 SUPERFAMILY Oxysterol-binding protein-like 108 485 IPR037239 -
Vvi2g0582 495 Gene3D - 199 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0582 Vvi-Chr2 5078324 5098481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0582 K20456 - vvi:100252278 917.916