Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0581 ATGCGGGTGAAGGAGATGCATCCATTGTGTTGTATATCGCTGGAGAGTCCCGGAATAGGAGACCAGTCTCCGGAGGTGAGTAGAGCGGCAACTGCAGCCTCTTCCGGCGGATCTGACGGCAATGCGGGGCGGCCGGCGGGATCCGATACCAGCGTCGCCGGAGTTCTCTACAAGTGGACAAATTACGGCAAGGGTTGGAGATCCCGGTGGTTCCTGCTAAGGAACGGCGTTCTTTCTTACTCCAAGATTCGCCGGCCGGAGAGCCTCCACCTACCATCACCGGCAGACGACATCCGGGTGATAGGCGACGTCTCCACGAGTCGCCTCTCCAGGTTGGACAGTGGTGGCGGCAGACGAAAGCACCAGAAAAATGTTGGCATCGTTCATCTCAAGATCTCGTCATTTCGTGAGAGCAAGTCCGATGATCGAAGATTTTATATATTTACTGCTACAAAAACCCTTCATCTAAGGACCGAGTCAAAGAGAGATCGGGTGGCTTGGATAGAAGCTTTAGTCTCAACTCGAAGCCTATTTTCTTTTAGACCGCTAAATGATAATCTCTCCCTGGTACCAAATGATATATCTGTATCAACTGAAAGGCTTAAAAATCGTTTGCTTGAAGAGGGAGCCCATGAGGGACTAGTTAGAGATTGCGAACAGATCATGCTTTCTGAGTTCTCGGAAATACAAGGCCAAGTTAAAGTTCTTTGTGAAGAACGATCCAATTTGCTCGATACATTAAGACAGCTGGAGGCAGCTAATATTGAAGCTGAAGTTTCTGGAATTAATGATAGTGAATTTCAATTGACAAAGCATGAACTGTCCAGCCTAGGGCGTGGAAAATATAGTGAGTGCAGCACAACTGAATCATCTGATGATATTGAGAAACAAGAGCTTGAGGAAGTGTCAGATGAGGAGGAAACCTCTTTCTTTGACACTAGAGAGGATTTTGCTGAACCCACAGTCAGTTGTGGGTCTATAACAGGAGTTGTAAATTACATGGATAAGCAAATGAAACCTGAAATTCAACTTGATAATGCAGAGAAGATTCATACTGAGAATAGATTTTGTGAATCTAGATATCCACAAATTGAAAGGCGAAAGAAGCTTCCCGATCCAGTTGAGAAAGAGAGAGGGGTAAGTCTTTGGTCTATGATCAAAGACAATGTCGGAAAGGATCTCACACGAGTTTGTCTCCCTGTTTATTTTAATGAGCCAATATCATCCCTTCAGAAATGTTTTGAGGACTTGGAGTACTCTTATCTTTTGGATCGAGCGTATGAATATGGAAAAGCGGGAAACAGTCTCCTAAGAGTTCTACATGTTGCAGCTTTTGCGGTTTCTGGATATGCGTCCTCTGAAGGTCGGCATTGCAAACCCTTCAACCCATTGCTAGGGGAAACTTATGAAGCTGATTTTCCTGATAAAGGAATTCGCTTTTTCTCTGAGAAGGTTAGTCATCACCCAACACTCATTGCCTGCCATTGTGAAGGTAAAGGGTGGAAATTCTGGGCTGACAGTAACCTACGAACAAAATTTTGGGGACGATCAATTCAGCTCGACCCTGTGGGAGTTTTGACCCTTGAGTTTGATGATGGTGAGGTTTTCAAATGGAGCAAGGTGTGTGCTGCTGCTTGA 1638 0.4536 MRVKEMHPLCCISLESPGIGDQSPEVSRAATAASSGGSDGNAGRPAGSDTSVAGVLYKWTNYGKGWRSRWFLLRNGVLSYSKIRRPESLHLPSPADDIRVIGDVSTSRLSRLDSGGGRRKHQKNVGIVHLKISSFRESKSDDRRFYIFTATKTLHLRTESKRDRVAWIEALVSTRSLFSFRPLNDNLSLVPNDISVSTERLKNRLLEEGAHEGLVRDCEQIMLSEFSEIQGQVKVLCEERSNLLDTLRQLEAANIEAEVSGINDSEFQLTKHELSSLGRGKYSECSTTESSDDIEKQELEEVSDEEETSFFDTREDFAEPTVSCGSITGVVNYMDKQMKPEIQLDNAEKIHTENRFCESRYPQIERRKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRVLHVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGIRFFSEKVSHHPTLIACHCEGKGWKFWADSNLRTKFWGRSIQLDPVGVLTLEFDDGEVFKWSKVCAAA* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0581 545 SMART PH_update 50 178 IPR001849 -
Vvi2g0581 545 Gene3D - 467 545 - -
Vvi2g0581 545 Pfam Pleckstrin homology domain 54 171 - -
Vvi2g0581 545 Gene3D - 46 177 IPR011993 -
Vvi2g0581 545 SUPERFAMILY PH domain-like 49 173 - -
Vvi2g0581 545 SUPERFAMILY Oxysterol-binding protein-like 376 542 IPR037239 -
Vvi2g0581 545 MobiDBLite consensus disorder prediction 15 48 - -
Vvi2g0581 545 ProSiteProfiles PH domain profile. 49 176 IPR001849 -
Vvi2g0581 545 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 52 543 IPR000648 GO:0008289
Vvi2g0581 545 Pfam Oxysterol-binding protein 381 543 IPR000648 GO:0008289
Vvi2g0581 545 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0581 Vvi-Chr2 5062795 5070823 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0581 K20456 - vvi:100253994 1063.14