Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0576 ATGCCACCTCCCACGCTTCTCTACTATCTTCCCATGGCGCCCTCCATCTCCCTGTTCAAATCACGTGACGTTGCCGTCATCGGGGCTGGCGCTGCCGGTTTAGTCGCCGCCCGTGAGCTCCGCCGTGAAGGCCACAAGGTCGTTGTCTTCGAGCGGGAACGCCAAGTGGGTGGGACCTGGGTCTACACGCCCACAGTGGAGACGGATCCACTTGGCTCCGACCCGTCTCGACACATAGTCCACTCCAGCCTCTACGCCTCCCTCCGCACCAACCTCCCTAGAGAGGTCATGGGTTTTCTGGACTACCCCTTCGTATCCACTGGTGAACCACATAGGGACCCCAGAAGGTTTCCGGGTCACCGAGAGGTCTCGCTTTATCTCAAGGATTTTGCGGTTGGGTTTGGACTCAATGAATTAATCCGCTTCGAGACGGAGGTAGTTTATGCTGGTTTGGTCGAGGATGAGAAGTGGAGGGTGAAGTCTAGAAGCGGAAACGATGCGGCAATTGATGTGGAGGAGATTTTTGATGCTGTGGTTGTTTGCAATGGCCATTACACAGAGCCCCGTCTTGCAGAAATTCCTGGCATTGATGCATGGCCAGGAAAGCATATGCATAGTCACAATTATCGTATTCCTGAGCCCTTTCGAGATCAGGTTGTAGTTTTGATAGGGGGTGCTGCAAGTGCTGTCGACATCTCTATGGACATTGCTCAAGTTGCTAAAGCAGTTCATATTGCATCTAGATCAGTTGAGGCTGGAATCTTGAAAAAGTTATCTGGCAATGCCATTGATAACATGTGGCTTCATCCTATGATAGAAAGTGTCCAGAAAGATGGTACTGTGATATTTTATGATGGGAGTGTGGTTCTTGCTGATGTAATTCTGCACTGCACGGGATACAAGTATCATTTCCCTTTTCTTGACACCAGTGGAATTGTGACTGTGGATGACAATCGTGTGGGACCTCTATACAAGCATATTTTTCCACCACATTTGGCTCCAGGGCTTTCCTTTGTTGGTTTGCCATGGAAGGTCCTCCCTTTCCCCATGTTTGAATTCCAAAGCAAATGGATAGCAGGTGCTCTCTCAGGTCGGATTGGACTCCCATCGCAGGAGGAGATGATGGCAGATGTTTCAGCCTTTTATTTGTCACTAGAAGCTTCTGACACACCAAAGCACTACACTCACAACTTGGCTGATTCTCAGTTTGAGTATGATGATTGGCTTGCCTTGGAATGCGGGATTCCAGGCGTTGAAGAATGGAGAAAGAAAATGTATGAAGCAACTGCCAAGAACAAGAAGGTCCGACCAGACAAATACCGCGACAAATGGGAAGATGAAGACTTAATGTTGGAAGCTCAGAAGGACTTCGCTGGATGCCGCCTGAATGGGGCTGGTGACAATTGA 1407 0.4947 MPPPTLLYYLPMAPSISLFKSRDVAVIGAGAAGLVAARELRREGHKVVVFERERQVGGTWVYTPTVETDPLGSDPSRHIVHSSLYASLRTNLPREVMGFLDYPFVSTGEPHRDPRRFPGHREVSLYLKDFAVGFGLNELIRFETEVVYAGLVEDEKWRVKSRSGNDAAIDVEEIFDAVVVCNGHYTEPRLAEIPGIDAWPGKHMHSHNYRIPEPFRDQVVVLIGGAASAVDISMDIAQVAKAVHIASRSVEAGILKKLSGNAIDNMWLHPMIESVQKDGTVIFYDGSVVLADVILHCTGYKYHFPFLDTSGIVTVDDNRVGPLYKHIFPPHLAPGLSFVGLPWKVLPFPMFEFQSKWIAGALSGRIGLPSQEEMMADVSAFYLSLEASDTPKHYTHNLADSQFEYDDWLALECGIPGVEEWRKKMYEATAKNKKVRPDKYRDKWEDEDLMLEAQKDFAGCRLNGAGDN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0576 468 PANTHER DIMETHYLANILINE MONOOXYGENASE 22 445 - -
Vvi2g0576 468 FunFam Flavin-containing monooxygenase 192 297 - -
Vvi2g0576 468 SUPERFAMILY FAD/NAD(P)-binding domain 20 248 IPR036188 -
Vvi2g0576 468 Pfam Flavin-binding monooxygenase-like 22 250 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0576 468 Pfam Flavin-binding monooxygenase-like 277 380 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0576 468 Gene3D - 24 443 IPR036188 -
Vvi2g0576 468 Gene3D - 192 297 IPR036188 -
Vvi2g0576 468 SUPERFAMILY FAD/NAD(P)-binding domain 272 447 IPR036188 -
Vvi2g0576 468 PRINTS Flavin-containing monooxygenase (FMO) signature 204 218 IPR000960 GO:0050660|GO:0050661
Vvi2g0576 468 PRINTS Flavin-containing monooxygenase (FMO) signature 284 311 IPR000960 GO:0050660|GO:0050661
Vvi2g0576 468 PRINTS Flavin-containing monooxygenase (FMO) signature 349 362 IPR000960 GO:0050660|GO:0050661
Vvi2g0576 468 PRINTS Flavin-containing monooxygenase (FMO) signature 231 246 IPR000960 GO:0050660|GO:0050661
Vvi2g0576 468 PRINTS Flavin-containing monooxygenase (FMO) signature 22 38 IPR000960 GO:0050660|GO:0050661
Vvi2g0576 468 PRINTS Flavin-containing monooxygenase (FMO) signature 46 70 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0576 Vvi-Chr2 4974774 4978172 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0576 - - vvi:100255688 939.102