Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0575 ATGTCGCTCACAATCTCCGAATTGAAAGTGCGCAACGTAGCCGTCATCGGCGCCGGCCCCTGCGGCTTAAGCGCTGCCAAGGAGCTTCGCCGAGAAGGCCACAAAGTCGTGGTGTTCGAGCGGCAAGGCCAAGCAGGCGGCACCTGGGTGTACAACCCCACCGTGGAGGCAGACCCACTTGGATCAGACCCGTCTCGAACCATAGTCCACTCAAGCGTCTACGCCTCCCTCCGCACCAACCTTCCCAGAGAGCTAATGGGGTTTCGAGACTACCCCTTCGTATCTACGGGTCAACCCTACAGCGAGTCCAGAAGGTTTCCAGGTCATCGAGAGGTCTTTCTTTATATCAACGATTATGCTACTGCGTTTGGACTCACTGAGTTAGTCCGCTTTGAGACAGAGGTGGTTTATGCTGGGTTGGTTAATGGGAAGTGGAGAGTGAGGTCTAGAATGGCAAATGGTGTGACAGTTGATGAGATTTTTGATGCAGTGGTTGTTTGCAATGGGCACGACACAGAGCCTCGTACTGCCGAAATTCCGGGGATTGATGCATGGCCGGGGAAGCAAATGCACAGCCACAATTATCGCATTCCTGACCCCTTTCGAGATCTAGTTGTAATTTTGATAGGGGTTGGTTCAAGTGCTCTTGATATCTCTATGGACATTGCTCAAGTTGCCAAAGAAGTTCACATTGCATCTAGATCAGCCAAGGTTGGAGTCTTGGGAAACGTGTCTGGCTATGATAATTTGAAGCTGCATCCTATGGTAGAGATAGAAAGCGTCCACAAGGACGGCTCGGTGATATTTAATGATGGCAGTGTGGTTCTTGCCGATGTTATTCTGCACTGCACAGGATACAAGTATCATTTACCTTTTCTTGACACTAATGGCATTGTCACTGTGGAAGACAATTGCGTTGGACCACTATACAAGCACACTTTTCCACCGGCTTTGGCACCTTGGCTTTCCTTTGTTGGGTTACCATTGATGGGTATTGGCTTCATCTTGTATGAATTTCAAAGCAACTGGATAGCAGGGGTTCTATCTGGTCGGATTGGACTCCCATCGGAAGAGGAGATGATGAGAGATGTTGAGGCATTGTACTTGTTGCTTGAGGCTTCAGGCACACCTAAGCGGTACACACATGGCATTGGTCATTGTCGGATAGAATACATGGACTGGTTTGCTGGCGAGTGTGGGATTCCAGGTGTCGAAGAATGGAGAAAGGAAATGTATTACGCAACCAAAAAGAATTATCTTGTCCGTCCACACGCATTCCGTGATGACTGGGAAGATGAGGAGTTGGCATTGAAAGCTCATGAGGACTTTGTCAAATGCCGCTCAAATGGAGTTGATCGCACTTGCATCTCCTAA 1374 0.4898 MSLTISELKVRNVAVIGAGPCGLSAAKELRREGHKVVVFERQGQAGGTWVYNPTVEADPLGSDPSRTIVHSSVYASLRTNLPRELMGFRDYPFVSTGQPYSESRRFPGHREVFLYINDYATAFGLTELVRFETEVVYAGLVNGKWRVRSRMANGVTVDEIFDAVVVCNGHDTEPRTAEIPGIDAWPGKQMHSHNYRIPDPFRDLVVILIGVGSSALDISMDIAQVAKEVHIASRSAKVGVLGNVSGYDNLKLHPMVEIESVHKDGSVIFNDGSVVLADVILHCTGYKYHLPFLDTNGIVTVEDNCVGPLYKHTFPPALAPWLSFVGLPLMGIGFILYEFQSNWIAGVLSGRIGLPSEEEMMRDVEALYLLLEASGTPKRYTHGIGHCRIEYMDWFAGECGIPGVEEWRKEMYYATKKNYLVRPHAFRDDWEDEELALKAHEDFVKCRSNGVDRTCIS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0575 457 FunFam Flavin-containing monooxygenase 178 280 - -
Vvi2g0575 457 PRINTS Flavin-containing monooxygenase (FMO) signature 217 232 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 PRINTS Flavin-containing monooxygenase (FMO) signature 190 204 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 PRINTS Flavin-containing monooxygenase (FMO) signature 270 297 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 PRINTS Flavin-containing monooxygenase (FMO) signature 11 27 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 PRINTS Flavin-containing monooxygenase (FMO) signature 335 348 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 PRINTS Flavin-containing monooxygenase (FMO) signature 35 59 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 SUPERFAMILY FAD/NAD(P)-binding domain 11 235 IPR036188 -
Vvi2g0575 457 Pfam Flavin-binding monooxygenase-like 11 237 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0575 457 Pfam Flavin-binding monooxygenase-like 263 367 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0575 457 PANTHER DIMETHYLANILINE MONOOXYGENASE 11 429 - -
Vvi2g0575 457 Gene3D - 178 283 IPR036188 -
Vvi2g0575 457 Gene3D - 13 428 IPR036188 -
Vvi2g0575 457 PIRSF FMO 249 403 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 PIRSF FMO 9 248 IPR000960 GO:0050660|GO:0050661
Vvi2g0575 457 SUPERFAMILY FAD/NAD(P)-binding domain 249 435 IPR036188 -
Vvi2g0575 457 FunFam Flavin-containing monooxygenase 281 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0575 Vvi-Chr2 4962612 4965728 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0575 - - vvi:100852623 932.939