Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0574 ATGTCGCCCACAATCTCCAAAATCAAATCACTCAACGTAGCGATCATCGGCGCCGGCGCCGCTGGTTTAGTTTCTGCCAGGGAGCTTCGCCGAGAAGGGCACCAGGTCGTGGTGTTCGAGCGGCAAGCCCAATTGGGTGGCACATGGGTATACAACCCCGGCGTGGAGGCAGACCCACTTGGGTCAGACCCATCTCGAGCCATAGTTCACTCCAGCCTCTACGCCTCCCTCCGCACCAATCTCCCCAGAGAAGCCATGGGGTTTCGAGCCTACCCTTTCGTATCCACTGGTCAACCCCATAGGGACTCCAGAAGGTTCCCAGGTCATCAAGAGGTCTTGCTTTATCTCAATGATTATGCTACTGAGTTTGGACTCACCGAGTTAGTCCGCTTCGAGACAGAAGTGGTTTATGCTGGGTTGTTTGAGGACGGGAAGTGGAAGGTGAGGTCTAGACAGGAAAATGGCGTGGCAGTTGATGTGGATGAGATTTTTGATGCTTTGGTTGTTTGCAATGGCCATTACACCGAGCCCCGTACCGCAGAAATTCCAGGAATTGATGCATGGCCAGGGAAGCAAATGCATAGCCACAATTATCGTATTCCTGAGCCCTATCGAGATCTTGTTGTAATTTTAATAGGGAGTGGTCCAAGTGCTCTGGATATCTCTATAGACATTGCTCAGGTTGCTAAAGAAGTTCATGTTGCATCTAGATCAGACGAGGCTGAAGTCTTGAGAAAGCAGTTTGGCTATCATCATATTCAGCTGCATCCTATGATAGAAAGCGTCCAGAAAGATGGTACCGTGATATTTTATGATGGGAGTATGGTTCTTGCTGATGTGATTCTGCACTGCACGGGATACAAGTATCATCTACCTTTTCTTGACACTCATGGCATTGTGACTGTGGACGACAATTGTGTGGGACCATTATACAAACACATTTTCCCACCAGTTCTCGCACCGAGGCTTTCCTTTGTTGGGTTACCATGGATGGTTCTCCCTTTCCCCATGTTTGAATTCCAAAGCAAATGGATAGCCGGTGTTCTCTCCGATCGGATTAGACTCCCATCGCAGGAGGAGATGATGGAAAATGTTTCAGCCTTTTATTTGTCACTAGAAGCTTCTGGCATGCCTAAGCGCCACACTCATAAAATGGGTGCCCATCTGTTCGAGTACAATGGCTGGCTTGCTGCTGAGTGTGGGGTTCCAGTGACTGAAGAGTGGAGAAAGAAAATGCTTTATGCAACCTTTCAGAACTATTTAGCCCACCCAGGGACATACCGTGATGCGTGGGAAGATGATGACTTGGTATTGGAAGCCCTTATGGAGATGGCCACAGTTGCAACTCTTGATTAA 1356 0.4867 MSPTISKIKSLNVAIIGAGAAGLVSARELRREGHQVVVFERQAQLGGTWVYNPGVEADPLGSDPSRAIVHSSLYASLRTNLPREAMGFRAYPFVSTGQPHRDSRRFPGHQEVLLYLNDYATEFGLTELVRFETEVVYAGLFEDGKWKVRSRQENGVAVDVDEIFDALVVCNGHYTEPRTAEIPGIDAWPGKQMHSHNYRIPEPYRDLVVILIGSGPSALDISIDIAQVAKEVHVASRSDEAEVLRKQFGYHHIQLHPMIESVQKDGTVIFYDGSMVLADVILHCTGYKYHLPFLDTHGIVTVDDNCVGPLYKHIFPPVLAPRLSFVGLPWMVLPFPMFEFQSKWIAGVLSDRIRLPSQEEMMENVSAFYLSLEASGMPKRHTHKMGAHLFEYNGWLAAECGVPVTEEWRKKMLYATFQNYLAHPGTYRDAWEDDDLVLEALMEMATVATLD* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0574 451 SUPERFAMILY FAD/NAD(P)-binding domain 246 434 IPR036188 -
Vvi2g0574 451 SUPERFAMILY FAD/NAD(P)-binding domain 10 240 IPR036188 -
Vvi2g0574 451 Gene3D - 13 429 IPR036188 -
Vvi2g0574 451 Pfam Flavin-binding monooxygenase-like 253 367 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0574 451 Pfam Flavin-binding monooxygenase-like 12 239 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0574 451 PRINTS Flavin-containing monooxygenase (FMO) signature 336 349 IPR000960 GO:0050660|GO:0050661
Vvi2g0574 451 PRINTS Flavin-containing monooxygenase (FMO) signature 35 59 IPR000960 GO:0050660|GO:0050661
Vvi2g0574 451 PRINTS Flavin-containing monooxygenase (FMO) signature 220 235 IPR000960 GO:0050660|GO:0050661
Vvi2g0574 451 PRINTS Flavin-containing monooxygenase (FMO) signature 11 27 IPR000960 GO:0050660|GO:0050661
Vvi2g0574 451 PRINTS Flavin-containing monooxygenase (FMO) signature 193 207 IPR000960 GO:0050660|GO:0050661
Vvi2g0574 451 PRINTS Flavin-containing monooxygenase (FMO) signature 271 298 IPR000960 GO:0050660|GO:0050661
Vvi2g0574 451 FunFam Flavin-containing monooxygenase 181 284 - -
Vvi2g0574 451 Gene3D - 181 284 IPR036188 -
Vvi2g0574 451 PANTHER DIMETHYLANILINE MONOOXYGENASE 12 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0574 Vvi-Chr2 4957898 4960773 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0574 - - vvi:100852585 914.835