Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0573 ATGTCATCATGTAACGTAGCCGTTATTGGAGCTGGCCCAGCGGGCTTAGTTGCAGCCCGGGAACTCCGTCGGGAAGGCCACAAGGCCGTTGTGTTCGAGCGCCAAGCTCAAGTGGGTGGCACCTGGGTGTACCAACCCAGCGTGGAGGCAGACCCACTCGCGTCCGACCCATCTCGACCCATCGTCCACTCCAGCCTCTACCCGTCTCTCCGCACCAACCTCCCCAGAGAAGTCATGGGGTTTCGAGACTACCCCTTCCTGTCCACGGGTTTAGCCCATAGGGACTCGAGAAGGTTCCCGGGTCATCGAGAGGTTTTGCATTTTATCAATGATTTTACCACCGAGTTTGGACTCATTGATTTGATCCGCTTCGAGACGGAGGTCGTTTATACAGGGCTGGGTGCGGATGGGAAGTGGAGGTTGAGATCCAGAGGGGCAAATGATGAGGAAGTCGACGAGATTTTTGATGCTGTGGTTGTCTGCAATGGGCATCACACTGAGCCCCGTATCGCCGAAATTCACGGCATTGATGCATGGCCGGGGAAGCAAATTCATAGCCACAATTATCGTATTCCTGAGCCCTTCCGAGATCAAGTTGTAATTTTGATAGGGAATGCTTTTAGTGCCGATGATATCTCTAGGGACATTGCTCAAGTTGCCAAAGAAGTTCATGTTGCGACTAGATCAGAAGAGAACAGTATGTTGGGAAAGCGGCCTGGCTATGATAATATGTGGCTTCATTCTACGGTCGAAAGTGTCCACAGAGATGGTACAGTGATATTTCAGGATGGAAGCGGGGTTCTTGCTGATGTGATTATGCACTGCACAGGGTACAAGTATTATTTCCCTTTTCTTGATACCAATGGCATCGTAACCGTGGATGATAATCGTGTGGGGCCATTATACAAGCACGTTTTTCCACCAGCTTTGGCTCCAGGGCTTTCCTTTGTTGGGTTACCATGGATGGTTCGTTTCTAA 978 0.5072 MSSCNVAVIGAGPAGLVAARELRREGHKAVVFERQAQVGGTWVYQPSVEADPLASDPSRPIVHSSLYPSLRTNLPREVMGFRDYPFLSTGLAHRDSRRFPGHREVLHFINDFTTEFGLIDLIRFETEVVYTGLGADGKWRLRSRGANDEEVDEIFDAVVVCNGHHTEPRIAEIHGIDAWPGKQIHSHNYRIPEPFRDQVVILIGNAFSADDISRDIAQVAKEVHVATRSEENSMLGKRPGYDNMWLHSTVESVHRDGTVIFQDGSGVLADVIMHCTGYKYYFPFLDTNGIVTVDDNRVGPLYKHVFPPALAPGLSFVGLPWMVRF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0573 325 PANTHER DIMETHYLANILINE MONOOXYGENASE 5 322 - -
Vvi2g0573 325 Gene3D - 3 175 IPR036188 -
Vvi2g0573 325 SUPERFAMILY FAD/NAD(P)-binding domain 2 232 IPR036188 -
Vvi2g0573 325 FunFam Flavin-containing monooxygenase 172 275 - -
Vvi2g0573 325 PRINTS Flavin-containing monooxygenase (FMO) signature 211 226 IPR000960 GO:0050660|GO:0050661
Vvi2g0573 325 PRINTS Flavin-containing monooxygenase (FMO) signature 28 52 IPR000960 GO:0050660|GO:0050661
Vvi2g0573 325 PRINTS Flavin-containing monooxygenase (FMO) signature 184 198 IPR000960 GO:0050660|GO:0050661
Vvi2g0573 325 PRINTS Flavin-containing monooxygenase (FMO) signature 262 289 IPR000960 GO:0050660|GO:0050661
Vvi2g0573 325 PRINTS Flavin-containing monooxygenase (FMO) signature 4 20 IPR000960 GO:0050660|GO:0050661
Vvi2g0573 325 SUPERFAMILY FAD/NAD(P)-binding domain 244 319 IPR036188 -
Vvi2g0573 325 Gene3D - 176 275 IPR036188 -
Vvi2g0573 325 Pfam Flavin-binding monooxygenase-like 5 230 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0573 325 Pfam Flavin-binding monooxygenase-like 248 319 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi2g0573 325 PIRSF FMO 2 237 IPR000960 GO:0050660|GO:0050661
Vvi2g0573 325 PIRSF FMO 232 321 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0573 Vvi-Chr2 4952685 4956004 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0573 - - vvi:100852547 666.766