Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0571 ATGGCCAATGTATCTGGGTTCTTTTCTCCTTCAGTTCCGAGTCTGAGACGGAGGGTACAACCGTCTATAGGTCTTTACCGATCTGGGTTTTGCTTTCCGGCGAAAATCAGCAAAAGGGTGTTCTGCTCCAGCACAATTGAAGGTGCGGAGAAGCTTTCCCCTTCTCAATCTCGGGTGCCCAGGATTGTAAGTAAAGGCTGCAAGCTAGTTGGATGTGGCTCAGCTGTACCAAGTCTTCAGATATCTAATGATGATCTTGCAAAAATTGTTGAAACTTCTGACGAATGGATATCTGTTCGCACTGGCATTCGTAACCGACGAGTTCTCTCAGGGAAAGATAGCTTGACAGCTTTGGCTGTAGAGGCAGCGAAGAGGGCTCTTGAGATGGCGCAGGTTGATCCAGATGAAGTGGATCTGGTCTTGATGTGTACATCTACTCCAGAGGATCTTTTTGGTAGTGCTCCTCAGATCCAAAAAGCACTTGGCTGCAAAAAAAATCCTTTGGCTTATGATATTACAGCTGCATGTAGCGGATTTGTGTTGGGTCTAGTCTCAGCTGCTTGTCATATTAGGGGCGGTGGGTTTCATAATGTTCTTGTGATTGGAGCTGATGCTCTTTCTCGCTATGTTGATTGGACTGATAGAGGGACCTGTATTCTCTTTGGGGATGCTGCTGGTGCTGTACTGGTTCAGGCCTGTGATAGTGAACAAGATGGTTTATTTGCTTTTGACTTGCATAGCGATGGTGATGGCCAAAGGCACTTAAATGCTTCAATGAAGAACAATGAAACAGATAGTACATTGGGTTCTAATGGTTCAGTACTGGATGTTCCCCAAGCACGCTCCTCTTATTCCTGCATCCAAATGAATGGCAAAGAGGTCTTTCGCTTTGCTGTTCGGTGTGTGCCACAGTCTATTGAGTCTGCCCTTGAGAAGGCTGGTCTCAGTGGATCTAACATCGATTGGTTACTGCTCCATCAGGCAAACCAGAGGATCATTGATGCAGTTGCAACGCGTTTAGAAGTTCCACCAGAGCGGGTCATATCAAACCTGGCTCAGTATGGTAACACAAGTGCAGCATCCATTCCGTTGGCATTGGATGAAGCTGTTCGAAGCGGGAAGGTACAGTCTGGCCATACTATTGCAACTGCAGGTTTTGGGGCAGGTCTCACATGGGGTTCCGCCATTGTTAGATGGGGATGA 1203 0.4697 MANVSGFFSPSVPSLRRRVQPSIGLYRSGFCFPAKISKRVFCSSTIEGAEKLSPSQSRVPRIVSKGCKLVGCGSAVPSLQISNDDLAKIVETSDEWISVRTGIRNRRVLSGKDSLTALAVEAAKRALEMAQVDPDEVDLVLMCTSTPEDLFGSAPQIQKALGCKKNPLAYDITAACSGFVLGLVSAACHIRGGGFHNVLVIGADALSRYVDWTDRGTCILFGDAAGAVLVQACDSEQDGLFAFDLHSDGDGQRHLNASMKNNETDSTLGSNGSVLDVPQARSSYSCIQMNGKEVFRFAVRCVPQSIESALEKAGLSGSNIDWLLLHQANQRIIDAVATRLEVPPERVISNLAQYGNTSAASIPLALDEAVRSGKVQSGHTIATAGFGAGLTWGSAIVRWG* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0571 400 FunFam 3-oxoacyl-[acyl-carrier-protein] synthase 3 64 400 - -
Vvi2g0571 400 SUPERFAMILY Thiolase-like 69 399 IPR016039 GO:0016746
Vvi2g0571 400 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 170 249 IPR013751 GO:0004315|GO:0006633
Vvi2g0571 400 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 310 399 IPR013747 -
Vvi2g0571 400 Gene3D - 64 400 IPR016039 GO:0016746
Vvi2g0571 400 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 66 400 - -
Vvi2g0571 400 CDD KAS_III 66 397 - -
Vvi2g0571 400 Hamap Beta-ketoacyl-[acyl-carrier-protein] synthase III [fabH]. 65 399 IPR004655 GO:0004315|GO:0006633
Vvi2g0571 400 NCBIfam beta-ketoacyl-ACP synthase III 67 399 IPR004655 GO:0004315|GO:0006633
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0571 1 399 Acyl Lipid Metabolism Gene Families AT1G62640 76.923 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0571 K00648 - vvi:100854507 793.497