Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0565 ATGGCTTCTTCGGGTTTTCTCGGACTGTCGCTTATCCACATTGCCTTACTTTTGAGCTTCTGTTTTGCTGAAGATCCCTTCGTTCACTTTGATTTTGAGGTCTCCTACATCACTGCTTCTCCTCTGGGTGTTCCCCAGCAGGTTATTGCTATAAATGGAAAGTTCCCCGGTCCTGTAGTTAATGCCACTACTAACAACAATGTCGTAGTTAATGTACGGAACAAATTGGATGAGAATCTCCTCATTACCTGGTCAGGGATTCAACAGCGGCGTAGCTCATGGCAAGATGGTGTTCCGGGCACAAACTGTCCGATTCCACCAAAATGGAATTGGACCTACCAGTTTCAGGTCAAGGATCAGATTGGGAGCTTCTTTTACTTCCCGTCTCTCAATTTTCAGAGAGCAGCAGGCGGGTATGGCGGTTTTATTATAAACAACCGAGCTATAATTCCGATTCCTTTCGCCACCCCAGATGGGGATATCACCATTATGATTGGTGATTGGTACACCAAGAATCACACGGATCTGAGGAAGACCCTTAACGGAGGAAAAGAACTTGGTATGCCAAATGGGGTTCTCATTAATGGGAAAGGCCCTTATAGATATAACACTACGCTTGTCCCTGAGGGCATTGACTATGAAACAATTGATGTCCAGCCAGGCAAGACTTATCGTATTCGTGTACACAATGTTGGAGTATCAACTAGTTTGAATTTCAGGATCCAGAATCATAATCTGCTTTTAGCAGAGACAGAGGGATCATACACAGTGCAACAGAATTATACTAGCTTAGATATTCATGTTGGGCAATCTTATTCATTTTTGGTAACCATGGATCAGAATGCAAGTACTGATTACTACATTGTAGCTAGCGCTAGGTTTGTGAATGAGTCACTTTGGAAACGGGTTACTGGTGTTGCCATTTTGCGTTATTCAAATTCCAAAGGAAAGGCATCTGGTCCCCTTCCAGACCCACCAAACGATGAATTCGACAAAACATTCTCAATGAACCAAGCTAGATCCATCAGGTGGAATGTATCTGCTAGTGGTGCTCGTCCTAACCCACAGGGATCTTTTAGGTATGGCTCAATCAATGTGACTGATGTTTATGTGTTGAAAAACAAGCCACCTGTGACGATCGATGGGAAAATGAGGACAACACTCAGTGGGATATCATTTGTCAATCCCACCACGCCCATTAGGCTTGCAGATCAGTTCAAGGTGAAGGGAGTATATAAGCTTGATTTCCCCAAAACCCCACTTACTGGATCACCTCGGATGGAAACATCTGTAATTAATGGTACATATAGGGGATTTATGGAAGTAATACTACAGAACAATGACACCAAGATGCAGAGCTATCACATGAATGGATATGCATTTTTCGTTGTTGGGATGGATTATGGTGAGTGGACTGAGAATAGCAGGGGCACGTATAATAAATGGGATGGAATTGCCCGCTCCACTACACAGGTTTTCCCTGGTGCATGGACGGCAATCTTAATCTCTCTTGACAATGTTGGAGTTTGGAACCTGAGAGCAGAAAATCTTGACTCATGGCATCTTGGCCAAGAAACATATGTCAGGGTTGTCAATCCAGAGGCTACAAACAAGACTGAGTTGCCCATGCCAGATAATGCCCTTTTTTGCGGTGCCCTGAGCAAAATGCAGAAGCCACAAGACATCACTTCTTCAACCACATCAATCAGTGGCAGTAAATTAAGTATTTTCTTCACTCTGTTGATGATCTATGCTGCAATCTCCACTTTCCACTAA 1776 0.4352 MASSGFLGLSLIHIALLLSFCFAEDPFVHFDFEVSYITASPLGVPQQVIAINGKFPGPVVNATTNNNVVVNVRNKLDENLLITWSGIQQRRSSWQDGVPGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNFQRAAGGYGGFIINNRAIIPIPFATPDGDITIMIGDWYTKNHTDLRKTLNGGKELGMPNGVLINGKGPYRYNTTLVPEGIDYETIDVQPGKTYRIRVHNVGVSTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESLWKRVTGVAILRYSNSKGKASGPLPDPPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDVYVLKNKPPVTIDGKMRTTLSGISFVNPTTPIRLADQFKVKGVYKLDFPKTPLTGSPRMETSVINGTYRGFMEVILQNNDTKMQSYHMNGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTTQVFPGAWTAILISLDNVGVWNLRAENLDSWHLGQETYVRVVNPEATNKTELPMPDNALFCGALSKMQKPQDITSSTTSISGSKLSIFFTLLMIYAAISTFH* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0565 591 Gene3D - 22 146 IPR008972 -
Vvi2g0565 591 FunFam Monocopper oxidase-like protein 158 351 - -
Vvi2g0565 591 Pfam Multicopper oxidase 160 313 IPR001117 -
Vvi2g0565 591 Pfam Multicopper oxidase 400 533 IPR011706 GO:0005507|GO:0016491
Vvi2g0565 591 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Vvi2g0565 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Vvi2g0565 591 SUPERFAMILY Cupredoxins 154 353 IPR008972 -
Vvi2g0565 591 Gene3D - 158 351 IPR008972 -
Vvi2g0565 591 FunFam Monocopper oxidase-like protein 363 561 - -
Vvi2g0565 591 Gene3D - 363 562 IPR008972 -
Vvi2g0565 591 SUPERFAMILY Cupredoxins 22 174 IPR008972 -
Vvi2g0565 591 SUPERFAMILY Cupredoxins 379 551 IPR008972 -
Vvi2g0565 591 PANTHER MULTI-COPPER OXIDASE 46 530 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0565 Vvi-Chr2 4870815 4875148 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0565 - - vvi:100262548 1186.02