Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0549 ATGCACCGCCTCAAACCCTCTCTCCAATTCCGCAAATCCATTACCTATACTTACGTAACACTTGCAAGGCACTTCTCCACTCACCAAACCCGCTTCGATCATGTTGGTCCCATGGCCTCGCTTCTCAAGTCCAGGTCCGTGGTTCGGTTCCGAGGACCGGACACAGTCAAGTTTCTTCAGGGTCTGTTGACCAACGATGTGCAGAGGTTTTGTGAATCCCCGGGTGAGATGACCTCGACTTTGGTCACCCCCAATGTGCCTTTCATATCGGATTCGCCTATGTATGCTTTAATGTTGACCCCTCAGGGGAGGTTTTTGTATGATTTGTTCCTGTACAGGCCGGCTCGGGCTAGTGAGAAGCTTGACAGGACTGGGTCTGGACCTGGGTCAGACCCTGATGGGCGGTTGGAGTTGTTAGCAGATGTGGATGCCACTGTCTTGGACGAGCTCTTGGAGAGGTTCAACAAATATCGGTTGAGGGCTGATGTTGTGATTGAGAATGTGGCGGAAGAATTCTCTTGCTGGCAGCGCTATGGTGAGAACCTTACTGAAAAGTTCTCATCTGCAGAAGAACCTGAGGCTGCTTCTGTTGGCTGGGGTGCTGCTGTTGATCCTGCTGGCACATCTTCTTCACATGGAAATAGTCATGGGTGGCAATGGTTTAAGGACCCCAGGTTGGATTCTCTTGGTTTCAGGGGAATTTTTCCATCTAATACAACACCACCCTTGGTTGAAGCAGACAAAGAAACAGATGAAAAAAATTACCTTCTGTGGAGATTAGAGAAGGGAGTTGCTGAAGGCTCAACTGAGATTCTGAAAGGTGAGGCAGTCCCACTTGAGTATAATCTTGCTGGTCTAAATGCAATAAGCTTTGACAAGGGATGCTATGTGGGCCAAGAGCTCATTGCCCGTACTCACCACCGGGGGGTCATTCGCAAGCGTCTGCTTCCTCTAAAGTTTCTTGATGATAGTGGAAAGGGTAAGACCTCATTTGTTTTGTTTTCCATGGCCTTTATCAACTTGGTATATTCAAAACATTCCCTTCCTGTTCGCCCAGAAATGGAGCAGAAAGTTGCACCTGGCTCGGATGTGATCAATGCCGTCTCTGGGAAGAAGGCTGGAACTGTGACAACTGCACTTGAGTGTCGTGGGCTAGGTCTTCTACGGTTGAACGAAGCCTTAAAAGGGCCGAGTAAATTGACCATACAAGGACAGGAAGATGTGAAGGTTGAGGCTATTAGACCAGAATGGTGGCCTACTGAATGGTTTCAAGAGTATCAACAAGATACTGCGTCCGCTTAG 1302 0.4854 MHRLKPSLQFRKSITYTYVTLARHFSTHQTRFDHVGPMASLLKSRSVVRFRGPDTVKFLQGLLTNDVQRFCESPGEMTSTLVTPNVPFISDSPMYALMLTPQGRFLYDLFLYRPARASEKLDRTGSGPGSDPDGRLELLADVDATVLDELLERFNKYRLRADVVIENVAEEFSCWQRYGENLTEKFSSAEEPEAASVGWGAAVDPAGTSSSHGNSHGWQWFKDPRLDSLGFRGIFPSNTTPPLVEADKETDEKNYLLWRLEKGVAEGSTEILKGEAVPLEYNLAGLNAISFDKGCYVGQELIARTHHRGVIRKRLLPLKFLDDSGKGKTSFVLFSMAFINLVYSKHSLPVRPEMEQKVAPGSDVINAVSGKKAGTVTTALECRGLGLLRLNEALKGPSKLTIQGQEDVKVEAIRPEWWPTEWFQEYQQDTASA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0549 433 SUPERFAMILY Folate-binding domain 38 310 - -
Vvi2g0549 433 Gene3D Probable tRNA modification gtpase trme; domain 1 10 337 IPR027266 GO:0005515
Vvi2g0549 433 PANTHER UNCHARACTERIZED 12 421 IPR045179 -
Vvi2g0549 433 NCBIfam folate-binding protein YgfZ 254 319 IPR017703 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0549 K22073 - vvi:104882013 812.757