Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0548 ATGAAGCTGGTTTGGTCTCCAGAGACTGCCTCCAAGGCTTATATCGATACTGTTAAAACGTGCGAGCTTTTCCAGGAATCGGGGGTGGCGGAGCTGGTTTCAGCCATGGCAGCTGGTTGGAACGCGCAGTTGATCGTGGAAACGTGGTCGCAGGGTGGGCTCATAGCGACGAGTGTTGGGTTGGCCATCGCAAGCCGCAATTCATGTGGGAGACATGTGTGCTTGGTACCGGATGAGCAGTCAAGGTCAGAGTATGTAGAGGCCATGGGTGAAGCCGGTGTGTCGACAGAAGTTATTGTAGGGAAGGCGGAGGATGTGATGGGTGGGCTATCAGGTGTGGATTTCTTGGTGGTGGATTGCCGGCGGAGGAACTTTCAGAGAGTATTTAGGCTTGCTAAGCTTAGCCACCGGGGAGCTGTTTTGGTATGCAAGAACGCCAACTCAACCAGCAACACGAGTTTCAAATGGCGGAGCGTTCTTGATCATGGGTCACGTCTGGTGAGGACGGTGTTCCTCCCGGTAGGGAAGGGATTGGATATCGCACATGTTGCGACTAGTGGGGGGAGTTCCGGTTCGACCCAGGGTCAGAGCCGTTGGATCAGGCATGTTGATCGAGAATCTGGGGAGGAGTATGTTATCCGAAAATGA 648 0.5386 MKLVWSPETASKAYIDTVKTCELFQESGVAELVSAMAAGWNAQLIVETWSQGGLIATSVGLAIASRNSCGRHVCLVPDEQSRSEYVEAMGEAGVSTEVIVGKAEDVMGGLSGVDFLVVDCRRRNFQRVFRLAKLSHRGAVLVCKNANSTSNTSFKWRSVLDHGSRLVRTVFLPVGKGLDIAHVATSGGSSGSTQGQSRWIRHVDRESGEEYVIRK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0548 215 PANTHER DUF1442 FAMILY PROTEIN 1 214 IPR009902 -
Vvi2g0548 215 Gene3D Vaccinia Virus protein VP39 8 186 IPR029063 -
Vvi2g0548 215 Pfam Protein of unknown function (DUF1442) 1 215 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0548 Vvi-Chr2 4745673 4746424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0548 - - vvi:100249883 423.32