Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0547 ATGGCTACTATCAGATGCACCACTAACATGATTGTCAAAGAAATATTTCATGTATCATTGTCCTTACGATCAGAACGGATGTTCCAGATGGTATTACCTAACTTCAGTGTTTACTGTGGTACCGTAAACCGTGGAATCAGCTATAGTCGGATTAGGTGTGCGGCAGCAGATTCTGGAGATGGTGGAAGGAAGGTGTCAGCACGCCTCTCACAAGTTCAGCAGCTTTTGCAAGAAGCTGAGGAGAGATCTCTCTCTTTTGGCAATGAGCCTACTCCCAAAATCACACTAGACCATGTTACTGTGAGTTTTGCAAGAAGTGGTGGGCCTGGAGGTCAGAATGTCAACAAAGTGAACACAAAGGTGGACATGCGCTTCAATGTTAAAAATGCTTATTGGCTAAGCGACAGGGTCAGGGAGAGGATTATGCAAATGGAAAAGAATCGGATTAACAAAGATGGGGAGATTGTGATTTCTTCAACAAAAACTAGAACACAGAAGGGTAACATTGAAGATGCACTGGGAAAACTACAGGCAATTATTGATGCTGCTTCATATGTCCCACCGCCCCCATCAGAAGAGCAGAAGAAAAAAATTGCCAAGTTGGCTGCTATTGGGGAGCAGAAACGGTTGCAGAACAAGAAGGTACTTTCACAGAAGAAGGCATTTAGAAGAAGCCGAGACAGTTGGGACTAA 693 0.4387 MATIRCTTNMIVKEIFHVSLSLRSERMFQMVLPNFSVYCGTVNRGISYSRIRCAAADSGDGGRKVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVTVSFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKVLSQKKAFRRSRDSWD* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0547 230 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 105 121 IPR000352 GO:0003747|GO:0006415
Vvi2g0547 230 PANTHER CLASS I PEPTIDE CHAIN RELEASE FACTOR 1 230 - -
Vvi2g0547 230 Pfam RF-1 domain 93 221 IPR000352 GO:0003747|GO:0006415
Vvi2g0547 230 FunFam Peptidyl-tRNA hydrolase ICT1 88 227 - -
Vvi2g0547 230 SUPERFAMILY Peptidyl-tRNA hydrolase domain-like 89 184 - -
Vvi2g0547 230 Coils Coil 62 82 - -
Vvi2g0547 230 Gene3D - 89 228 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0547 K15033 - vvi:100265433 453.366