Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0544 ATGGCTCCATCATCTTCTTCTTCTTCTCCGTCTTCCTCTAGAGCCTCCCCTTCGCGCCCTCCGCCCTCTCCCCGGTCTCCTCACTTCACTCCTATTCAAGAGTGCGAAAGGGAAGAACAAGAAGACGAAGTGACTCCAAGTTCTTGTACAGACAAAGGAGACCCTTCAAAACACCATCCGACGCCCATCCATAAATCTGACAAAAATGGAAAACAGTCTACCAGAAAACGTACGGATTCGGACAGCCTTTACGAAGACGACCGTACGGTCTCTTGCAACAAGTGTCGGCCAAGCGCCCGGGAAAAGATCTCCGTGGTTCCTCTGGACAACGCCGGCATGAATCGGAACTCGTCGTCGCTCGCAAGCCCCAACGGTATCTTCAAATCGATACTCTCGTCGTTTACAAGGAAGAGTCCGAGGACGTCAGATACATCGTGGACGGCAAGAGAAGAGCACTGGAAGATCGCCGTGGCGGAGCTATCCCACAAGCTCATTCAAGCTACGAGGAAGAGAGACGAAGCTCTCCTCGAAGCTTCTCGGCTCAAGTACTCCATGGCTGAATTGGAGAAAAAGCTGAACAAGCTCGAAGTCTACTGCCACAATTTAAAGTCGGGACTTGACGTTTGCAGCGGCAATTCACCGTACCGGCCAAGGAAAGATCAACAAATCGAAGCGAATCATTTCAAAATTCGCGATCACGATAAGGTGATCGAACATTTCTTGGTAGCAGTATCAGAAGCCCGCTCTTCGATTCGACTCCTCAGCCGATCGCTCACTTTGCAACTCCGGCAAATTGGAGGTAAAGTCTACGAGAGAATATCACTCCTCCTTCAACCTTACGATGTAAAACTTTCGCTCTCCAAGAACCCTAGAACCCTCCTCGTCTACCTAGAAGCTTTGCTGAGCAAGGCCTTCTTCGAAGACTTCGAGTCGGTTGGATTCCAGAAGAATGCTTCCAATCAAATTCTAAACCCAATAGAACGATGCGAAGCGAACTACGCGTCATTCAACATTCTACAAGGGCTAACATGGGATGAAGTGTTGAACAAAGGAACGAGGCACTTCAGCGAGGAGTTCAGTAAATTCTGTGACAGGAAGATGAGTGAGATCGTGGCTATGCTGGCTTGGAACCGTGCTTGGACTGAGCCGCTGCTACAGGCGTTCTTCTCAGCCTCCAAGAGCGTGTGGTTGGTGCACCTTCTGGCCATGTCGGTGCACCCGAGCTTGCCAATCTTTAGAGTTGAGACTGGGACGAAGTTTGACACTGTGTACATGGACGACATGGGTGGAGACAAGGCTCGGAGGCTGGTCCCAGTCATGGTCCGGATCATGGTGGCACCGGGGTTCTATGTTTATGGCAACGTGGTCAAGTGCAAGGTCCTTTGCAGGTACTCTAATGATAATAATCAAGACAGGGGTGTGCCCTTAACCCCTACAATTTAG 1443 0.5031 MAPSSSSSSPSSSRASPSRPPPSPRSPHFTPIQECEREEQEDEVTPSSCTDKGDPSKHHPTPIHKSDKNGKQSTRKRTDSDSLYEDDRTVSCNKCRPSAREKISVVPLDNAGMNRNSSSLASPNGIFKSILSSFTRKSPRTSDTSWTAREEHWKIAVAELSHKLIQATRKRDEALLEASRLKYSMAELEKKLNKLEVYCHNLKSGLDVCSGNSPYRPRKDQQIEANHFKIRDHDKVIEHFLVAVSEARSSIRLLSRSLTLQLRQIGGKVYERISLLLQPYDVKLSLSKNPRTLLVYLEALLSKAFFEDFESVGFQKNASNQILNPIERCEANYASFNILQGLTWDEVLNKGTRHFSEEFSKFCDRKMSEIVAMLAWNRAWTEPLLQAFFSASKSVWLVHLLAMSVHPSLPIFRVETGTKFDTVYMDDMGGDKARRLVPVMVRIMVAPGFYVYGNVVKCKVLCRYSNDNNQDRGVPLTPTI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0544 480 Coils Coil 157 205 - -
Vvi2g0544 480 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 6 465 IPR042316 -
Vvi2g0544 480 MobiDBLite consensus disorder prediction 42 92 - -
Vvi2g0544 480 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0544 Vvi-Chr2 4716821 4718407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0544 - - vvi:100260132 901.738