Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0543 ATGGCGGCTACCAACACCACGCCACCCATTGACTCATCTTCTGCTGAAGAACTCACAGCGAAGGCTGTGCACAAGAGGTACGAAGGGTTGGTGATGGTTCGAACCAAGGCCATAAAGGGAAAGGGAGCTTGGTACTGGGCTCACCTAGAGCCCTTGTTGGTGCACAACAATGATACTGGTTTGCCCAAAGCCGTGAAGCTCAGGTGCTCGCTCTGCGAAGCCGTTTTCTCCGCGTCGAACCCGTCTCGGACGGCTTCGGAGCATCTCAAGAGAGGAACGTGTCCCAATTTCAATTCTGTGCCCAAACCCATTTCCTCAATATCACCTTCTTCCATGGCTTCGCCTTCTTCTTCGGTGCAACACAACCACCGTAAGCGTAGTAGCTCCTCCAGTGGTGGCGGTGGCGGTGGCGTGGGTGGGGGCGGTTCTTCTGCTTCGTACCAAGTTTCACCACTGGCGATGGTCGATCCGTCGCGATTCTGCGGTGAGCTGGCATACTCGCCGGCGGTGTCGACTACTGTTGTGACTGCCAGTACCGGGTCTTTGTTGCCTCAGCAGCATTTGATGTTATCAGGTGGAAAAGAGGACCTGGGAGCTTTAGCCATGTTGGAAGATAGTGTGAAGAAGCTCAAGAGTCCCAAAACTTCACCTGGCCCAGCTTTGAGCAAAACCCAGATTGATTCTGCTTTTGATTTTCTTGCTGATTGGCTCTATGAGTCTTGTGGGTCTGTCTCTTTCTCAAGCCTCGACCACCCGAAATTTCGGGCGTTTCTCAATCAAGTCGGATTGCCGGCGATTTCTCGGAGGGAGTTCGCTGGTCCTAGATTGGATGCCAAGTTCGAAGAAGCCAAGGCTGAGTCAGAAGCTAGAATTCGAGACGCCATGTTCTTTCAAATTGCCTCTGATGGTTGGCAACCAAAGCATCATGGGTTTCTGGGTGCAGAAAACTTGGTGAATTTAACTGTGAATCTCCCAAATGGGACTAGTGTTTTCAGGAGGGCAGTGTTTGTTAGTGGGAATGTTCCTCCCAAGTATGCGGAGGAGGTTTTGTGGGAGACAATTACAGGCATTTGCGGGAATGCTGTGCAGCAATGTGTAGGGGTAGTTGCAGACAAGTTTAAGGCCAAGGCATTGAAGAATTTAGAGAATCAGAATCACTGGATGGTTAATCTTTCTTGCCAGTATCAAGGGTTCAATAGTTTGATTAAGGATTTTAGCAAAGAGCTTCCTTTATTTCAGAAAGTCACTGAGAATTGTTTGAAGGTTGCAAATTTTGTTAATAACCACTCTCAAGTTCGTAACATCTTTCAGAAGTATCAGTTGCAGGAGTACAGGCATGTTGAATTACTAAGAGTACCAGTTCGAGAGCATGAGAAATTGAACTTTGAACCTGTGTACACAATGCTGGAGGATATATTGAATTCAGCTCGAGCACTACAGTTGGTTCTTTTAGATGAATCATATAAGATAGTATCAGTAGAGGACCCAATTGCCAGAGAATTTGCAGAGATGGGAAGAGATATGAGGTTTTGGAGTGAATTGGAAGCGGTGCATTCACTGGTTAAATTGATCAAGGAAATGGCTCAGGAAATTGAGACAGAAAGGCCACTAGTTGGGCAATGCCTCCCACTTTGGAATGAGCTTAGAGCAAAGGTGAAGGACTGGTGTTCCAAGTTCCACATTGATGAAGCGCCTGTGGAGAAGGTGATTGACAGGCGGTTCAAAAAGAACTATCACCCAGCTTGGGCCGCTGCCTTTATACTTGATCCACTTTATTTGATTAGGGACACTAGTGGGAAGTACCTTCCGCCATTCAAATGTTTGACACCCGATCAGGAGAAAGATGTGGACAAGCTCATAACTCGGCTTGTATCGAGGGAGGAGGCTCATATTGCGCTAATGGAGCTCATGAAATGGAGAACGGATGGGCTCGAACCAGTCTACGCGCAGGCTGTTCAGTTGAAGGAGAGGGACCCCATTACCGGAAAAATGAAAACTGCAAACCCTCAGAGCAGCAGGCTTGTGTGGGAAACTTACCTCACGGAGTTCAAGTCACTAGCAAAAGTTGCAGTTAGGCTTATCTTCCTTCATGCAACCTCATGTGGATTTAAGTGCAATTTGTCTTTCTTGAGATGGGTTTGCGCCAATGGGCACTCAAGGGCAGGCATGTACAGGGCTCAGAAGATGATATTCATTGCAGCCCATTCCAAGCTTGAAAGGCGGGATTTTTCCAATGATGAAGATAAGGATGCAGAGCTCTTGGCCTCCACAAATGAAACAATGGACAAAAATATTGTTGGACTGGAGATGCCGCCATAA 2319 0.4752 MAATNTTPPIDSSSAEELTAKAVHKRYEGLVMVRTKAIKGKGAWYWAHLEPLLVHNNDTGLPKAVKLRCSLCEAVFSASNPSRTASEHLKRGTCPNFNSVPKPISSISPSSMASPSSSVQHNHRKRSSSSSGGGGGGVGGGGSSASYQVSPLAMVDPSRFCGELAYSPAVSTTVVTASTGSLLPQQHLMLSGGKEDLGALAMLEDSVKKLKSPKTSPGPALSKTQIDSAFDFLADWLYESCGSVSFSSLDHPKFRAFLNQVGLPAISRREFAGPRLDAKFEEAKAESEARIRDAMFFQIASDGWQPKHHGFLGAENLVNLTVNLPNGTSVFRRAVFVSGNVPPKYAEEVLWETITGICGNAVQQCVGVVADKFKAKALKNLENQNHWMVNLSCQYQGFNSLIKDFSKELPLFQKVTENCLKVANFVNNHSQVRNIFQKYQLQEYRHVELLRVPVREHEKLNFEPVYTMLEDILNSARALQLVLLDESYKIVSVEDPIAREFAEMGRDMRFWSELEAVHSLVKLIKEMAQEIETERPLVGQCLPLWNELRAKVKDWCSKFHIDEAPVEKVIDRRFKKNYHPAWAAAFILDPLYLIRDTSGKYLPPFKCLTPDQEKDVDKLITRLVSREEAHIALMELMKWRTDGLEPVYAQAVQLKERDPITGKMKTANPQSSRLVWETYLTEFKSLAKVAVRLIFLHATSCGFKCNLSFLRWVCANGHSRAGMYRAQKMIFIAAHSKLERRDFSNDEDKDAELLASTNETMDKNIVGLEMPP* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0543 772 SUPERFAMILY Ribonuclease H-like 361 733 IPR012337 -
Vvi2g0543 772 MobiDBLite consensus disorder prediction 105 134 - -
Vvi2g0543 772 PANTHER OSJNBA0013A04.12 PROTEIN 23 740 - -
Vvi2g0543 772 MobiDBLite consensus disorder prediction 105 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0543 Vvi-Chr2 4699941 4703868 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0543 - - vvi:100253287 1464.13