Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0540 ATGCTTGAACATATATATATGTCTGAAAGAAGTTTCCGGCGACGAATTCCTTCCATCAGACGGAGAACCAGACCCCCTCACCCACCCCCTTCGCCGCATCGGCGAACTTTGACTCATCGGCGATTGAAGAAACCGTCGAAGCCCGTTGCAGTTCTGCACAGGTGCTCCTCCGAGCCTATTCTTTGGACCGTCAGCTTCTTCGTCGACGGAGACGATAATCGGAATCTGGAGTCCGATGGCGTGCTCTTCCGTCCCCAGACGTGTACGGACGTGTTGGCGACGTCGTCGTTTTGCTCTTCGTTCTTGTCCCTCTCGCCGCAAAATCAGGAGGGTTACAAAAAAGACGCAAAAGTGGTGGTGAATGTAACCGTCGAAGGGAGTCCAGGACCCATCCGAACTATGGTTCAATTGGGGTCCAGTGTGGAGGACACCATCCAGCTCGTAATCGACGAGTATCGCAAAGAAGGGCGAAGCCCACAGCTCCACAAGGACGCTGCTGCCGCTTTCGAAATGCATCACTCCCATTTCTGCCTCCAAAGCCTGAACAAATCAGATGCCATCGGGGATGTTGGGAGCAGAAGTTTCTATCTTAGGAAAAGCAGCAGCAGTGGTAGGAGTAGCAATGGAGAACAAACCCCAGAAGCGGCTCCGCCTGTTCAGCGTCCTGTTTTTTTTTCCCCGGCCTCCCTGGATCGAAGGATCAAAAAAATTGTAAGAAGAATGCGAAGGTTTTGGAAGCTGTTGGGTTGCTTGCATTGCGAATGA 765 0.5216 MLEHIYMSERSFRRRIPSIRRRTRPPHPPPSPHRRTLTHRRLKKPSKPVAVLHRCSSEPILWTVSFFVDGDDNRNLESDGVLFRPQTCTDVLATSSFCSSFLSLSPQNQEGYKKDAKVVVNVTVEGSPGPIRTMVQLGSSVEDTIQLVIDEYRKEGRSPQLHKDAAAAFEMHHSHFCLQSLNKSDAIGDVGSRSFYLRKSSSSGRSSNGEQTPEAAPPVQRPVFFSPASLDRRIKKIVRRMRRFWKLLGCLHCE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0540 254 MobiDBLite consensus disorder prediction 16 43 - -
Vvi2g0540 254 MobiDBLite consensus disorder prediction 198 214 - -
Vvi2g0540 254 PANTHER BNAC05G50380D PROTEIN 48 253 IPR040358 -
Vvi2g0540 254 MobiDBLite consensus disorder prediction 198 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0540 Vvi-Chr2 4671532 4672685 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0540 - - vvi:100265823 425.631