Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0537 ATGGGGGATCTGTTTGCATGGATATTCTCCTTCTTCATCCTCATTGCCCTCCTAGTCCTCGTTGTTTACCAGCTCATGTGCTTGGCAGATCTGGAGTTTGATTATATCAACCCCTATGACTCTGCATCTCGGATAAACAAGGTTGTTTTGCCGGAGTTTATCACACAAGGAGTCTTATGCTTGTTCTATTCCCTAACAGGCCATTGGTTTATGTCACTCTTGTGTGGTCCATACCTGTACTACAATGTGAGACTGTACCAACGAAGACAGCACCTGATAGATGTAACTGAGATATTCAACTTGCTCAATTGGGAAAAGAAGCAACGGCTCTTCAAACTTGGCTATCTAATTTTTCTCCTCTTCCTTTCCATATTCTGGATGATTTTGAGCGCATTGGAGGATCATGATAATGATTAG 417 0.4221 MGDLFAWIFSFFILIALLVLVVYQLMCLADLEFDYINPYDSASRINKVVLPEFITQGVLCLFYSLTGHWFMSLLCGPYLYYNVRLYQRRQHLIDVTEIFNLLNWEKKQRLFKLGYLIFLLFLSIFWMILSALEDHDND* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0537 138 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Vvi2g0537 138 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Vvi2g0537 138 PANTHER CORNICHON-RELATED 4 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0537 Vvi-Chr2 4638283 4641564 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0537 K20368 - vvi:100258514 264.233