Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi2g0536 | ATGGTCAATGCCACTAAAGGATTGTTCATTTCATGTGACATACCCATGGCACAATTCATCATCAACATGAATGCTTCAATGCCGGCATCACAGAAATTTATAATACACGTCCTGGATAGCACTCATCTGTTTGTGCAACCTCATGTGGCTGAAATGATACGAAGTGCCATTTCCGAGTTTAGAGAACAGAATTCTTATGAGAAGCCTGCTTGA | 213 | 0.4085 | MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEFREQNSYEKPA* | 71 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi2g0536 | 70 | Gene3D | - | 1 | 68 | IPR035935 | - | |
| Vvi2g0536 | 70 | FunFam | General transcription and DNA repair factor IIH subunit TFB5 | 1 | 68 | - | - | |
| Vvi2g0536 | 70 | PANTHER | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 | 1 | 69 | IPR009400 | GO:0000439|GO:0006289|GO:0006367 | |
| Vvi2g0536 | 70 | Pfam | Transcription factor TFIIH complex subunit Tfb5 | 1 | 68 | IPR009400 | GO:0000439|GO:0006289|GO:0006367 | |
| Vvi2g0536 | 70 | SUPERFAMILY | TFB5-like | 6 | 69 | IPR035935 | - | |
| Vvi2g0536 | 70 | SMART | Tbf5_2 | 1 | 68 | IPR009400 | GO:0000439|GO:0006289|GO:0006367 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi2g0536 | K10845 | - | vvi:100263663 | 141.739 |