Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0530 ATGGCGGCTTCGGGTGGTTACAGAAATGGAACTCACAAGGGCAATATGAAGGTGGATAGGCTGGTCTCCCTCAGTTCCGCCACCAAGTCTTCCTCTCTCAAGTCCAAGCCTTCCCCAGCGTCGCCCGCTTCTTCTGGGCTCCGCCGCAACAGCACCGGCTCTGTCGGTGGAGCAAAGGACGATGCTGGAGTTCCTGGGAGGGTTCGAGTGGCTGTGAGATTGCGACCGCGGAATGCAGAGGAGTCGGTGGCTGATGCTGATTTTGCTGATTGTGTAGAATTGCAGCCAGAGCTTAAAAGGTTAAAACTTCGAAAGAACAATTGGGACTCAGACACCTATGAGTTCGATGAAGTGCTTACAGAGTTTGCATCACAAAAACGTGTATATGAAGTTGTTGCGAAACCTGTTGTGGAGAGTGTTTTGGATGGTTACAATGGAACAGTCATGGCATATGGACAGACTGGTACTGGGAAAACATACACACTTGGGCGACTTGGAGAGGAAGATACTGCTGCGCGTGGAATAATGGTGCGTGCAATGGAGGATATTTTAGCAGAAATTTCTCCAGAGACTGATTCTGTCTCAGTCTCCTATTTGCAGCTTTATATGGAAACCATTCAGGACCTCCTTGATCCTACTAATGACAACATATCTATCATGGAAGACCCGAAAACTGGAGATGTTTCACTACCAGGGGCCACCCTAGTAGAAATCAGGGACCAGCGGAGTTTTGTGGAACTGCTACGGTTAGGGGAAGCTCACCGCTTTGCTGCAAACACAAAATTGAATACCGAATCATCTCGTAGTCATGCTATTTTGATGGTACATGTTAAGAAATCTGTAAAGGGAAGGGATTCAGCTCTTTTAAGTGAAAATTGTAACAGTTCCCACATGGTTAAAACTTTTAAGCCACCTGTTGTTCGGAAAGGGAAGTTGGTTGTGGTAGATCTTGCAGGTTCAGAGCGTATTGATAAGTCAGGAAGTGAGGGACATACATTAGAGGAAGCCAAGTCTATTAATCTTTCTTTAAGTGCTTTGGGAAAGTGTATTAATGCACTGGCAGAGAATAGTGCACATGTCCCGGTTCGTGATTCAAAACTTACAAGATTGCTTCGAGATTCATTTGGAGGCACTGCAAGGACTTCATTGGTTGTCACTATTGGTCCATCCCCACGTCATCGTGGAGAGACATCAAGCACCATCATGTTTGGACAAAGGGCTATGAAGGTGGAGAATATGTTGAAAATAAAGGAAGAGTTTGATTATAAAAGTTTGTCTAGAAGGCTTGAGATTCAATTAGACAAACTCATTGTGGAACATGAAAGGCAGCAAAAAGCATTTGAAGATGAGATTGAAAGGATAACTGTAGAAACACAAAATCATATATCTGAAACTGAAAGAAACTATGCTGATGCGTTGGAGAAAGAAAGATTGAAATATCAGGAAGACTACATGCAATCAATAAAGAAGCTTGAGGAGCAATGGGTGATGAATCAGCGGAAGCATGGCAGTGAAAGAACCACATTTGGGCTCAAAGATGATAACTTTGATAAGACACTTAATGGAGTGGTTCCTGTGGCATCTGCTGCTGAAGAAATAGCAGAGCTCAAAAAATTGCTTCAGAATGAGGCTTCTTTAAGAACAGCTACTGAAGAGGAAGTCAATAACCTTAAGAGCCAAGTAGTTCAGTGGAAAAGGATTGAGGCAGCAGGAAATTCTGAGATATTAAAACTTCGCAAGATGCTGGAAGATGAGGCACACCAAAAAGAGAAACTTGAAGAAGAAATTGCAATACTGCAAAGTCAGTTGTTTCAATTAAGTTTTGAAGCTGATGAGACAAGCAGACAACTTGACAGAGGTGGATCTGGGAAAGTTCTTGGAAATCTGGATTCTTTCATGTCACAAATTAGGCATTCACAGCTTAGTGATTCAGGAAATGGGGATAAGGCCTCGATAGCCAAACTCTTCGAACAAGGTACCATAAAATGCCTGGTCGGATTTTTACAGTTAATGGCTGCATATACTTAA 2028 0.431 MAASGGYRNGTHKGNMKVDRLVSLSSATKSSSLKSKPSPASPASSGLRRNSTGSVGGAKDDAGVPGRVRVAVRLRPRNAEESVADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDILAEISPETDSVSVSYLQLYMETIQDLLDPTNDNISIMEDPKTGDVSLPGATLVEIRDQRSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKKSVKGRDSALLSENCNSSHMVKTFKPPVVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPVRDSKLTRLLRDSFGGTARTSLVVTIGPSPRHRGETSSTIMFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVEHERQQKAFEDEIERITVETQNHISETERNYADALEKERLKYQEDYMQSIKKLEEQWVMNQRKHGSERTTFGLKDDNFDKTLNGVVPVASAAEEIAELKKLLQNEASLRTATEEEVNNLKSQVVQWKRIEAAGNSEILKLRKMLEDEAHQKEKLEEEIAILQSQLFQLSFEADETSRQLDRGGSGKVLGNLDSFMSQIRHSQLSDSGNGDKASIAKLFEQGTIKCLVGFLQLMAAYT* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0530 675 ProSitePatterns Kinesin motor domain signature. 310 321 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi2g0530 675 MobiDBLite consensus disorder prediction 21 52 - -
Vvi2g0530 675 ProSiteProfiles Kinesin motor domain profile. 67 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0530 675 Coils Coil 526 567 - -
Vvi2g0530 675 Coils Coil 575 609 - -
Vvi2g0530 675 Coils Coil 470 490 - -
Vvi2g0530 675 PRINTS Kinesin heavy chain signature 311 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0530 675 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0530 675 PRINTS Kinesin heavy chain signature 360 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0530 675 CDD KISc 67 408 - -
Vvi2g0530 675 Gene3D Kinesin motor domain 59 440 IPR036961 -
Vvi2g0530 675 Pfam Kinesin motor domain 73 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0530 675 FunFam Kinesin-like protein 59 440 - -
Vvi2g0530 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 444 IPR027417 -
Vvi2g0530 675 PANTHER CENTROMERE PROTEIN E 67 501 IPR027640 GO:0003777|GO:0007018
Vvi2g0530 675 SMART kinesin_4 65 418 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0530 675 MobiDBLite consensus disorder prediction 1 62 - -
Vvi2g0530 675 Coils Coil 426 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0530 Vvi-Chr2 4544176 4558601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0530 68 439 Miscellaneous Gene Families AT2G21380 34.625 1.90e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0530 - - vvi:100852786 1223.76