Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0527 ATGATGATTATTGTCGCCGTTATCCAAAAATTGACTGGAGGATCTGTTGCCATCTCTCTCTCTCTCTCTAAAACGCGGAATTTTCTGGCTCGCATCTCACACGATTCACTCCACTTTCTTTCAAAACTTTCTCGCTCTTTCTTTCAAATTTGCTCGGAAAATTTCACTCCAGGAGTTCAATGGCTGCGACCCTTTGAGGCTTGGGATGTGAAAATGGCGGCTTCGGGTGGTTACAGAAATGGAACTCACAAGGGCAATATGAAGGTGGATAGGCTGGTCTCCCTCAGTTCCGCCACCAAGTCTTCCTCTCTCAAGTCCAAGCCTTCCCCAGCGTCGCCCGCTTCTTCTGGGCTCCGCCGCAACAGCACCGGCTCTGTCGGTGGAGCAAAAGACGATGCTGGAGTTCCTGGGAGGGTTCGAGTGGCTGTAAGATTGCGACCGCGGAATGCAGAGGAGTTGGTGGCTGATGCTGATTTTGCTGATTGTGTAGAATTGCAGCCAGAGCTTAAAAGGTTAAAACTTCGAAAGAACAATTGGGACTCAGACACCTATGAGTTCGATGAAGTGCTTACAGAGTTTGCATCACAAAAACGTGTATATGAAGTTGTTGCGAAACCTGTTGTGGAGAGTGTTTTGGATGGTTACAATGGAACAGTCATGGCATATGGACAGACTGGTACTGGGAAAACATACACACTTGGGCGACTTGGAGAGGAAGATACTGCTGCGCGTGGAATAATGGTGCGTGCAATGGAGGATATTTTAGCAGAAATTTCTCCAGAGACTGATTCTGTCTCAGTCTCCTATTTGCAGCTTTATATGGAAACCATTCAGGACCTCCTTGATCCTACTAATGACAACATATCTATCATGGAAGACCCGAAAACTGGAGATGTTTCACTACCAGGGGCCACCCTAGTAGAAATCAGGGACCAGCGGAGTTTTGTGGAACTGCTACGGTTAGGGGAAGCTCACCGCTTTGCTGCAAACACAAAATTGAATACCGAATCATCTCGTAGTCATGCTATTTTGATGGTACATGTTAAGAAATCTGTAAAGGGAAGGGATTCAGCTCTTTTAAGTGAAAATTGTAACAGTTCCCACATGGTTAAAACTTTTAAGCCACCTGTTGTTCGGAAAGGGAAGTTGGTTGTGGTAGATCTTGCAGGTTCAGAGCGTATTGATAAGTCAGGAAGTGAGGGACATACATTAGAGGAAGCCAAGTCTATTAATCTTTCTTTAAGTGCTTTGGGAAAGTGTATTAATGCACTGGCAGAGAATAGTGCACATGTCCCGGTTCGTGATTCAAAACTTACAAGATTGCTTCGAGATTCATTTGGAGGCACTGCAAGGACTTCATTGGTTGTCACTATTGGTCCATCCCCACGTCATCGTGGAGAGACATCAAGCACCATCATGTTTGGACAAAGGGCTATGAAGGTGGAGAATATGTTGAAAATAAAGGAAGAGTTTGATTATAAAAGTTTGTCTAGAAGGCTTGAGATTCAATTAGACAAACTCATTGTGGAACATGAAAGGCAGCAAAAAGCATTTGAAGATGAGGTTGAAAGGATAACTGTAGAAACACAAAATCATATATCTGAAACTGAAAGAAACTATGCTGATGCGTTGGAGAAAGAAAGATTGAAATATCAGGAAGACTACATGCAATCAATAAAGAAGCTTGAGGAGCAATGGGTGATGAATCAGCGGAAGCATGGCAGTGAAAGAACCACATTTGGGCTCAAAGATGATAACTTTGATAAGACACTTAATGGAGTGGTTCCTGTGGCATCTGCTGCTGAAGAAATAGCAGAGCTCAAAAAATTGCTTCAGAATGAGGCTTCTTTAAGAACAGCTACTGAAGAGGAAGTCAATAACCTTAAGAGCCAAGTAGTTCAGTGGAAAAGGATTGAGGCAGCAGGAAATTCTGAGATATTAAAACTTCGCAAGATGCTGGAAGATGAGGCACACCAAAAAGAGAAACTTGAAGAAGAAATTGCAATACTGCAAAGTCAGTTGTTTCAATTAAGTTTTGAAGCTGATGAGACAAGCAGACAACTTGACAGAGGTGGATCTGGGAAAGTTCTTGGAAATCTGGATTCTTTCGTGTCACAAATTAGGCATTCACAGCTTAGTGATTCAGGAAATGGGGATAAGGCCTCGATAGCTAAACTCTTCGAACAAGGTACCATAAAATGCCTGGTCGGATTTTTACAGTTAATGGCTGCATATACTTAA 2241 0.4302 MMIIVAVIQKLTGGSVAISLSLSKTRNFLARISHDSLHFLSKLSRSFFQICSENFTPGVQWLRPFEAWDVKMAASGGYRNGTHKGNMKVDRLVSLSSATKSSSLKSKPSPASPASSGLRRNSTGSVGGAKDDAGVPGRVRVAVRLRPRNAEELVADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDILAEISPETDSVSVSYLQLYMETIQDLLDPTNDNISIMEDPKTGDVSLPGATLVEIRDQRSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKKSVKGRDSALLSENCNSSHMVKTFKPPVVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPVRDSKLTRLLRDSFGGTARTSLVVTIGPSPRHRGETSSTIMFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVEHERQQKAFEDEVERITVETQNHISETERNYADALEKERLKYQEDYMQSIKKLEEQWVMNQRKHGSERTTFGLKDDNFDKTLNGVVPVASAAEEIAELKKLLQNEASLRTATEEEVNNLKSQVVQWKRIEAAGNSEILKLRKMLEDEAHQKEKLEEEIAILQSQLFQLSFEADETSRQLDRGGSGKVLGNLDSFVSQIRHSQLSDSGNGDKASIAKLFEQGTIKCLVGFLQLMAAYT* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0527 746 Coils Coil 497 528 - -
Vvi2g0527 746 PANTHER CENTROMERE PROTEIN E 138 677 IPR027640 GO:0003777|GO:0007018
Vvi2g0527 746 FunFam Kinesin-like protein 130 511 - -
Vvi2g0527 746 PRINTS Kinesin heavy chain signature 214 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0527 746 PRINTS Kinesin heavy chain signature 382 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0527 746 PRINTS Kinesin heavy chain signature 431 452 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0527 746 Coils Coil 541 561 - -
Vvi2g0527 746 CDD KISc 138 479 - -
Vvi2g0527 746 Gene3D Kinesin motor domain 130 511 IPR036961 -
Vvi2g0527 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 515 IPR027417 -
Vvi2g0527 746 Pfam Kinesin motor domain 144 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0527 746 Coils Coil 597 638 - -
Vvi2g0527 746 Coils Coil 646 680 - -
Vvi2g0527 746 SMART kinesin_4 136 489 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0527 746 MobiDBLite consensus disorder prediction 98 123 - -
Vvi2g0527 746 ProSitePatterns Kinesin motor domain signature. 381 392 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi2g0527 746 ProSiteProfiles Kinesin motor domain profile. 138 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0527 746 MobiDBLite consensus disorder prediction 98 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0527 Vvi-Chr2 4511891 4531803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0527 139 510 Miscellaneous Gene Families AT2G21380 34.625 5.99e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0527 - - vvi:100246107 1223.38